Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 MIR3683-201ENST00000580847 82 ntBASIC2.06□□□□□ -2.08
NECTIN4Q96NY8 SDR42E1P4-201ENST00000620894 481 ntBASIC2.06□□□□□ -2.08
NECTIN4Q96NY8 MTND4LP32-201ENST00000636111 270 ntBASIC2.06□□□□□ -2.08
NECTIN4Q96NY8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 Y_RNA.2-201ENST00000362330 96 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 Y_RNA.48-201ENST00000362710 103 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 Y_RNA.58-201ENST00000362807 102 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 Y_RNA.61-201ENST00000362835 102 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 Y_RNA.154-201ENST00000363624 102 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 RNU6-944P-201ENST00000364023 107 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 SNORD115-32-201ENST00000364079 82 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 RNY3P1-201ENST00000365085 102 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 RNY3-201ENST00000365484 102 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 U8.10-201ENST00000384260 133 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 Y_RNA.490-201ENST00000384413 102 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 RNY4P36-201ENST00000391116 96 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 RNU6-1304P-201ENST00000411374 106 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 Z82188.1-201ENST00000436709 154 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 AC245102.2-201ENST00000448956 180 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 RNA5SP233-201ENST00000459153 113 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 RPS27P21-201ENST00000486977 252 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 AC018868.1-201ENST00000491307 315 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 AC145146.1-201ENST00000496370 254 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 RPL23AP63-201ENST00000498752 471 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 MIR4287-201ENST00000579398 78 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 AC005899.2-201ENST00000584353 90 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 PISRT1.1-201ENST00000616930 107 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 AC090517.3-201ENST00000625170 141 ntBASIC2.05□□□□□ -2.08
NECTIN4Q96NY8 RNU4-9P-201ENST00000364951 139 ntBASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 RNU6-378P-201ENST00000384324 107 ntBASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 SNORA46.1-201ENST00000391069 153 ntBASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 SNORA75.6-201ENST00000391318 127 ntBASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 AL512604.1-201ENST00000404812 257 ntBASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 RNA5SP494-201ENST00000410653 129 ntBASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 OR2AQ1P-201ENST00000451972 200 ntBASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 AL137159.1-201ENST00000452808 512 ntBASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 AC087477.1-201ENST00000465747 340 ntBASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 AC104435.1-201ENST00000483483 166 ntBASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 RPL30P10-201ENST00000488148 337 ntBASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 SNORA25.15-201ENST00000516487 89 ntBASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 SCARNA16.2-201ENST00000516520 172 ntBASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.04□□□□□ -2.08
NECTIN4Q96NY8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 MIRLET7G-201ENST00000362280 84 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 RNU6-797P-201ENST00000363101 109 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 RNY1P10-201ENST00000363268 113 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 RNU1-23P-201ENST00000363361 144 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 SNORA16B-201ENST00000364674 135 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 RNU4-56P-201ENST00000364700 142 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 RNA5SP190-201ENST00000365222 118 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 RNA5SP37-201ENST00000365420 130 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 SNORA17.3-201ENST00000391159 129 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 HMGN2P38-201ENST00000423806 265 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 AC027124.2-201ENST00000428249 105 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 CBX3P6-201ENST00000430257 527 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 snoU13.6-201ENST00000458785 104 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 snoU13.30-201ENST00000458951 104 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 Y_RNA.653-201ENST00000459091 95 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 AC007215.1-201ENST00000464893 276 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 EIF4A1P12-201ENST00000551910 141 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 AC104581.2-201ENST00000572227 430 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 MIR4448-201ENST00000584360 86 ntBASIC2.03□□□□□ -2.08
NECTIN4Q96NY8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 SNORD115-8-201ENST00000363856 82 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 Y_RNA.259-201ENST00000364619 101 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 SNORD115-38-201ENST00000365037 82 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 RNU6-546P-201ENST00000383991 107 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 RNU6-890P-201ENST00000384121 107 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 RNU6-17P-201ENST00000384245 107 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 RNU6-18P-201ENST00000384527 107 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 MIR29C-201ENST00000385231 88 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 U3.40-201ENST00000408706 208 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 Y_RNA.597-201ENST00000410463 100 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 AC090255.1-201ENST00000495779 349 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 MIR514B-201ENST00000516774 80 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 AL590705.4-201ENST00000532209 134 ntBASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.02□□□□□ -2.09
NECTIN4Q96NY8 RMST_6.1-201ENST00000611980 203 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms