Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
ZNF48Q96MX3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ZNF48Q96MX3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ZNF48Q96MX3 AL109809.4-201ENST00000603520 2185 ntBASIC2.63□□□□□ -1.99
ZNF48Q96MX3 BX322639.1-202ENST00000423987 2213 ntBASIC2.62□□□□□ -1.99
ZNF48Q96MX3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
ZNF48Q96MX3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ZNF48Q96MX3 Y_RNA.217-201ENST00000364214 105 ntBASIC2.62□□□□□ -1.99
ZNF48Q96MX3 Y_RNA.308-201ENST00000365043 101 ntBASIC2.62□□□□□ -1.99
ZNF48Q96MX3 Y_RNA.398-201ENST00000383952 99 ntBASIC2.62□□□□□ -1.99
ZNF48Q96MX3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.62□□□□□ -1.99
ZNF48Q96MX3 MIR888-201ENST00000401186 77 ntBASIC2.62□□□□□ -1.99
ZNF48Q96MX3 RPL23AP36-201ENST00000413895 458 ntBASIC2.62□□□□□ -1.99
ZNF48Q96MX3 AP000705.1-201ENST00000454567 350 ntBASIC2.62□□□□□ -1.99
ZNF48Q96MX3 Y_RNA.641-201ENST00000459414 105 ntBASIC2.62□□□□□ -1.99
ZNF48Q96MX3 RN7SL863P-201ENST00000462370 296 ntBASIC2.62□□□□□ -1.99
ZNF48Q96MX3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.62□□□□□ -1.99
ZNF48Q96MX3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.62□□□□□ -1.99
ZNF48Q96MX3 RNU6-1219P-201ENST00000516143 112 ntBASIC2.62□□□□□ -1.99
ZNF48Q96MX3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.62□□□□□ -1.99
ZNF48Q96MX3 SNORA31.23-201ENST00000517219 133 ntBASIC2.62□□□□□ -1.99
ZNF48Q96MX3 LARP7P3-201ENST00000579888 337 ntBASIC2.62□□□□□ -1.99
ZNF48Q96MX3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.62□□□□□ -1.99
ZNF48Q96MX3 AC104465.1-201ENST00000611365 139 ntBASIC2.62□□□□□ -1.99
ZNF48Q96MX3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ZNF48Q96MX3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ZNF48Q96MX3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ZNF48Q96MX3 Y_RNA.8-201ENST00000362353 102 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 RNU6-873P-201ENST00000363833 107 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 Y_RNA.304-201ENST00000365011 112 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 RNU6-81P-201ENST00000365608 104 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 MIR627-201ENST00000384979 97 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 Y_RNA.597-201ENST00000410463 100 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 RNU6-1135P-201ENST00000411083 103 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 HMGN2P35-201ENST00000412164 270 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 AL451074.5-201ENST00000415894 435 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 AC138623.1-201ENST00000418060 216 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 OOSP1P1-201ENST00000423265 274 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.61□□□□□ -1.99
ZNF48Q96MX3 RPS15AP5-201ENST00000436276 388 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 AC010095.1-201ENST00000443543 144 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 AC009237.7-201ENST00000447357 229 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 snoU13.6-201ENST00000458785 104 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.61□□□□□ -1.99
ZNF48Q96MX3 AC104027.1-201ENST00000521887 300 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.61□□□□□ -1.99
ZNF48Q96MX3 AC055872.1-201ENST00000570978 278 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 MIR2682-201ENST00000580305 110 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.61□□□□□ -1.99
ZNF48Q96MX3 AP001485.1-201ENST00000604799 199 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 AC022441.3-201ENST00000605737 136 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 MIR6852-201ENST00000621699 66 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 AC018692.3-201ENST00000623929 123 ntBASIC2.61□□□□□ -1.99
ZNF48Q96MX3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
ZNF48Q96MX3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZNF48Q96MX3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.61□□□□□ -1.99
ZNF48Q96MX3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.6□□□□□ -1.99
ZNF48Q96MX3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.6□□□□□ -1.99
ZNF48Q96MX3 SNORA26.3-201ENST00000391119 136 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 Y_RNA.595-201ENST00000410403 105 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 RPS26P42-201ENST00000413485 326 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 COTL1P1-201ENST00000422309 375 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 AC078809.1-201ENST00000427601 140 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 AC112220.1-201ENST00000434628 355 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 AC005042.3-201ENST00000453230 174 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 RPS27AP10-201ENST00000496103 208 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.6□□□□□ -1.99
ZNF48Q96MX3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.6□□□□□ -1.99
ZNF48Q96MX3 RNU6-966P-201ENST00000516479 104 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 SNORA64.4-201ENST00000516632 81 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 CKS1BP7-201ENST00000522230 235 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 AP005660.1-201ENST00000522972 293 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.6□□□□□ -1.99
ZNF48Q96MX3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.6□□□□□ -1.99
ZNF48Q96MX3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ZNF48Q96MX3 AC021231.3-201ENST00000558497 370 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 AC233702.2-202ENST00000562547 291 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 AC108706.1-201ENST00000611053 297 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 AC010999.1-201ENST00000611856 324 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 AL365265.1-201ENST00000621045 234 ntBASIC2.6□□□□□ -1.99
ZNF48Q96MX3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
ZNF48Q96MX3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
ZNF48Q96MX3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
ZNF48Q96MX3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ZNF48Q96MX3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ZNF48Q96MX3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.59□□□□□ -1.99
ZNF48Q96MX3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ZNF48Q96MX3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ZNF48Q96MX3 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 AC092268.1-201ENST00000342691 405 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 SNORA80A-201ENST00000363922 136 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 Y_RNA.441-201ENST00000384123 112 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 RNU6-1081P-201ENST00000384537 107 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 SNORA44-201ENST00000384584 132 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 AC023141.4-201ENST00000412031 328 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 NDUFS5P4-201ENST00000412983 318 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 AC244670.1-201ENST00000436879 112 ntBASIC2.59□□□□□ -1.99
ZNF48Q96MX3 CST9LP2-201ENST00000437612 320 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms