Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 HMGB1P33-201ENST00000563485 527 ntBASIC1.61□□□□□ -2.15
CCDC7Q96M83 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.61□□□□□ -2.15
CCDC7Q96M83 RPL17P51-201ENST00000605218 238 ntBASIC1.61□□□□□ -2.15
CCDC7Q96M83 AC092954.2-201ENST00000609103 430 ntBASIC1.61□□□□□ -2.15
CCDC7Q96M83 DISC2.1-201ENST00000612827 205 ntBASIC1.61□□□□□ -2.15
CCDC7Q96M83 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.61□□□□□ -2.15
CCDC7Q96M83 MIR6515-201ENST00000619843 57 ntBASIC1.61□□□□□ -2.15
CCDC7Q96M83 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CCDC7Q96M83 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CCDC7Q96M83 RNU6-522P-201ENST00000364497 107 ntBASIC1.6□□□□□ -2.15
CCDC7Q96M83 RNU4-75P-201ENST00000364621 146 ntBASIC1.6□□□□□ -2.15
CCDC7Q96M83 SNORD31B-201ENST00000364977 69 ntBASIC1.6□□□□□ -2.15
CCDC7Q96M83 Y_RNA.373-201ENST00000365600 103 ntBASIC1.6□□□□□ -2.15
CCDC7Q96M83 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC7Q96M83 SNORA29-201ENST00000384183 140 ntBASIC1.6□□□□□ -2.15
CCDC7Q96M83 RNU6-933P-201ENST00000384424 107 ntBASIC1.6□□□□□ -2.15
CCDC7Q96M83 MIR521-1-201ENST00000384902 87 ntBASIC1.6□□□□□ -2.15
CCDC7Q96M83 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
CCDC7Q96M83 RNA5SP494-201ENST00000410653 129 ntBASIC1.6□□□□□ -2.15
CCDC7Q96M83 AC009310.1-201ENST00000414414 451 ntBASIC1.6□□□□□ -2.15
CCDC7Q96M83 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC7Q96M83 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC7Q96M83 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC7Q96M83 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC7Q96M83 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC7Q96M83 AC005786.1-201ENST00000588553 154 ntBASIC1.6□□□□□ -2.15
CCDC7Q96M83 AC010525.2-201ENST00000590920 195 ntBASIC1.6□□□□□ -2.15
CCDC7Q96M83 AC121333.1-201ENST00000567488 2709 ntBASIC1.6□□□□□ -2.15
CCDC7Q96M83 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC7Q96M83 MIR340-201ENST00000362125 95 ntBASIC1.59□□□□□ -2.15
CCDC7Q96M83 RNU1-76P-201ENST00000362903 159 ntBASIC1.59□□□□□ -2.15
CCDC7Q96M83 SNORD114-26-201ENST00000363543 72 ntBASIC1.59□□□□□ -2.15
CCDC7Q96M83 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CCDC7Q96M83 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC7Q96M83 NCOR1P3-201ENST00000420479 303 ntBASIC1.59□□□□□ -2.15
CCDC7Q96M83 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC7Q96M83 DLGAP5P1-201ENST00000430307 464 ntBASIC1.59□□□□□ -2.15
CCDC7Q96M83 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CCDC7Q96M83 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC7Q96M83 RNU6-314P-201ENST00000516574 104 ntBASIC1.59□□□□□ -2.15
CCDC7Q96M83 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC7Q96M83 MRPS36P4-201ENST00000534436 298 ntBASIC1.59□□□□□ -2.15
CCDC7Q96M83 AC026371.1-201ENST00000551867 419 ntBASIC1.59□□□□□ -2.15
CCDC7Q96M83 AC100830.2-201ENST00000581636 240 ntBASIC1.59□□□□□ -2.15
CCDC7Q96M83 AC083806.3-201ENST00000614016 455 ntBASIC1.59□□□□□ -2.15
CCDC7Q96M83 FAM157A-202ENST00000615155 405 ntBASIC1.59□□□□□ -2.15
CCDC7Q96M83 RNU4-24P-201ENST00000364565 139 ntBASIC1.59□□□□□ -2.16
CCDC7Q96M83 RNU6-968P-201ENST00000384076 107 ntBASIC1.59□□□□□ -2.16
CCDC7Q96M83 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
CCDC7Q96M83 AL590002.1-201ENST00000406554 418 ntBASIC1.59□□□□□ -2.16
CCDC7Q96M83 RNA5SP100-201ENST00000410903 110 ntBASIC1.59□□□□□ -2.16
CCDC7Q96M83 RNA5SP59-201ENST00000410922 110 ntBASIC1.59□□□□□ -2.16
CCDC7Q96M83 USP9YP28-201ENST00000435142 589 ntBASIC1.59□□□□□ -2.16
CCDC7Q96M83 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.59□□□□□ -2.16
CCDC7Q96M83 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.16
CCDC7Q96M83 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.59□□□□□ -2.16
CCDC7Q96M83 MTCO1P29-201ENST00000496868 288 ntBASIC1.59□□□□□ -2.16
CCDC7Q96M83 AC097473.1-201ENST00000508142 408 ntBASIC1.59□□□□□ -2.16
CCDC7Q96M83 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.59□□□□□ -2.16
CCDC7Q96M83 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.59□□□□□ -2.16
CCDC7Q96M83 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.59□□□□□ -2.16
CCDC7Q96M83 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.59□□□□□ -2.16
CCDC7Q96M83 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.59□□□□□ -2.16
CCDC7Q96M83 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.59□□□□□ -2.16
CCDC7Q96M83 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.59□□□□□ -2.16
CCDC7Q96M83 AC091812.1-201ENST00000432235 1948 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 Y_RNA.41-201ENST00000362646 102 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 Y_RNA.132-201ENST00000363421 102 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 RNU6-1286P-201ENST00000383871 107 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 Y_RNA.615-201ENST00000410769 117 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 AC016907.1-201ENST00000419483 435 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 AL591704.2-201ENST00000421658 181 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 MTCO3P46-201ENST00000425787 232 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 AC007395.1-201ENST00000451333 677 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 AC016925.1-201ENST00000458303 298 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 RNU6-506P-201ENST00000516553 94 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 SUMO2P18-201ENST00000518873 252 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CCDC7Q96M83 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC7Q96M83 MIR5094-201ENST00000578766 85 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 AC146944.4-201ENST00000602697 718 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC7Q96M83 AC103810.8-201ENST00000607347 118 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 RMST_3.1-201ENST00000611651 109 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 AC022513.1-201ENST00000624512 117 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC7Q96M83 AC099654.12-201ENST00000639868 649 ntBASIC1.58□□□□□ -2.16
CCDC7Q96M83 RNU6-545P-201ENST00000362681 104 ntBASIC1.57□□□□□ -2.16
CCDC7Q96M83 RNU5B-2P-201ENST00000363036 113 ntBASIC1.57□□□□□ -2.16
CCDC7Q96M83 RNU6-254P-201ENST00000363377 107 ntBASIC1.57□□□□□ -2.16
CCDC7Q96M83 Y_RNA.436-201ENST00000384097 102 ntBASIC1.57□□□□□ -2.16
CCDC7Q96M83 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CCDC7Q96M83 MIR1285-1-201ENST00000408593 84 ntBASIC1.57□□□□□ -2.16
CCDC7Q96M83 RNU6-908P-201ENST00000410160 94 ntBASIC1.57□□□□□ -2.16
CCDC7Q96M83 HSPE1P21-201ENST00000438283 308 ntBASIC1.57□□□□□ -2.16
CCDC7Q96M83 AL357134.1-201ENST00000445848 426 ntBASIC1.57□□□□□ -2.16
CCDC7Q96M83 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC7Q96M83 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC7Q96M83 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms