Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.21□□□□□ -2.21
USP47Q96K76 AC090115.3-201ENST00000553218 849 ntBASIC1.21□□□□□ -2.21
USP47Q96K76 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.21□□□□□ -2.21
USP47Q96K76 AC109347.2-201ENST00000610220 349 ntBASIC1.21□□□□□ -2.21
USP47Q96K76 HULC.1-201ENST00000612720 240 ntBASIC1.21□□□□□ -2.21
USP47Q96K76 AC008147.4-201ENST00000617570 1204 ntBASIC1.21□□□□□ -2.21
USP47Q96K76 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.21□□□□□ -2.21
USP47Q96K76 Y_RNA.30-201ENST00000362572 97 ntBASIC1.21□□□□□ -2.22
USP47Q96K76 Y_RNA.255-201ENST00000364581 97 ntBASIC1.21□□□□□ -2.22
USP47Q96K76 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.22
USP47Q96K76 RNU6-331P-201ENST00000384724 107 ntBASIC1.21□□□□□ -2.22
USP47Q96K76 AL117342.1-201ENST00000404861 406 ntBASIC1.21□□□□□ -2.22
USP47Q96K76 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.21□□□□□ -2.22
USP47Q96K76 AC027119.1-201ENST00000440877 241 ntBASIC1.21□□□□□ -2.22
USP47Q96K76 AC073415.1-201ENST00000449240 153 ntBASIC1.21□□□□□ -2.22
USP47Q96K76 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.21□□□□□ -2.22
USP47Q96K76 CCDC34P1-201ENST00000507441 517 ntBASIC1.21□□□□□ -2.22
USP47Q96K76 AC067942.3-201ENST00000512025 362 ntBASIC1.21□□□□□ -2.22
USP47Q96K76 AC011406.1-201ENST00000512440 370 ntBASIC1.21□□□□□ -2.22
USP47Q96K76 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.21□□□□□ -2.22
USP47Q96K76 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.21□□□□□ -2.22
USP47Q96K76 DEFB131C-201ENST00000528817 165 ntBASIC1.21□□□□□ -2.22
USP47Q96K76 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.21□□□□□ -2.22
USP47Q96K76 AC005609.4-201ENST00000625071 447 ntBASIC1.21□□□□□ -2.22
USP47Q96K76 AC018630.2-201ENST00000534866 2403 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 SNORA63D-201ENST00000364359 132 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 RNU6-348P-201ENST00000384386 107 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 RNU11-5P-201ENST00000391216 129 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 MIR300-201ENST00000401138 83 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 AL606923.1-201ENST00000406616 190 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 MTCO3P29-201ENST00000432119 779 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 AC073910.1-201ENST00000445047 438 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 USP9YP29-201ENST00000445112 563 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 OR2AQ1P-201ENST00000451972 200 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 AC010493.1-201ENST00000513479 292 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 SNORA14.1-201ENST00000516113 141 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 RNU6-856P-201ENST00000516959 98 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.2□□□□□ -2.22
USP47Q96K76 AC145350.1-201ENST00000567426 208 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 AC005668.1-201ENST00000571142 476 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 MIR4714-201ENST00000580728 77 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 AC004223.2-201ENST00000590309 544 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 AC108706.1-201ENST00000611053 297 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 AL078604.3-201ENST00000615580 211 ntBASIC1.2□□□□□ -2.22
USP47Q96K76 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
USP47Q96K76 RNU6-227P-201ENST00000362865 103 ntBASIC1.19□□□□□ -2.22
USP47Q96K76 Y_RNA.381-201ENST00000365666 102 ntBASIC1.19□□□□□ -2.22
USP47Q96K76 SNORA29-201ENST00000384183 140 ntBASIC1.19□□□□□ -2.22
USP47Q96K76 MIR1283-1-201ENST00000408494 87 ntBASIC1.19□□□□□ -2.22
USP47Q96K76 RPS27P16-201ENST00000425758 201 ntBASIC1.19□□□□□ -2.22
USP47Q96K76 AC025465.4-201ENST00000513422 638 ntBASIC1.19□□□□□ -2.22
USP47Q96K76 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.19□□□□□ -2.22
USP47Q96K76 RRN3P3-201ENST00000549207 578 ntBASIC1.19□□□□□ -2.22
USP47Q96K76 MIR3937-201ENST00000580135 106 ntBASIC1.19□□□□□ -2.22
USP47Q96K76 MIR4753-201ENST00000585119 83 ntBASIC1.19□□□□□ -2.22
USP47Q96K76 NIFKP6-201ENST00000598115 845 ntBASIC1.19□□□□□ -2.22
USP47Q96K76 AP003465.2-201ENST00000602571 373 ntBASIC1.19□□□□□ -2.22
USP47Q96K76 AC064836.2-201ENST00000609491 462 ntBASIC1.19□□□□□ -2.22
USP47Q96K76 AC073114.1-201ENST00000612027 490 ntBASIC1.19□□□□□ -2.22
USP47Q96K76 BX322639.1-202ENST00000423987 2213 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
USP47Q96K76 SNORD33-201ENST00000362761 85 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 RNU5A-6P-201ENST00000384136 116 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 RNU6-1158P-201ENST00000391167 107 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 MRPL35P1-201ENST00000404272 572 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 AL161935.2-201ENST00000414627 60 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 MRPL35P3-201ENST00000421557 364 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.18□□□□□ -2.22
USP47Q96K76 MTND3P9-201ENST00000429526 346 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 AC004386.2-201ENST00000441858 148 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 AC016717.1-201ENST00000448918 286 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.18□□□□□ -2.22
USP47Q96K76 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.18□□□□□ -2.22
USP47Q96K76 RPS29P27-201ENST00000463711 170 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 RNU6-948P-201ENST00000516374 107 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.18□□□□□ -2.22
USP47Q96K76 MIR5006-201ENST00000583027 110 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 AC087683.1-201ENST00000591187 441 ntBASIC1.18□□□□□ -2.22
USP47Q96K76 MTCO3P38-201ENST00000468910 766 ntBASIC1.17□□□□□ -2.22
USP47Q96K76 Y_RNA.717-201ENST00000517106 92 ntBASIC1.17□□□□□ -2.22
USP47Q96K76 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.17□□□□□ -2.22
USP47Q96K76 AC087752.4-201ENST00000605911 462 ntBASIC1.17□□□□□ -2.22
USP47Q96K76 AC104458.1-201ENST00000608243 463 ntBASIC1.17□□□□□ -2.22
USP47Q96K76 AC007684.1-201ENST00000609671 477 ntBASIC1.17□□□□□ -2.22
USP47Q96K76 AC005562.2-201ENST00000618264 111 ntBASIC1.17□□□□□ -2.22
USP47Q96K76 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.17□□□□□ -2.22
USP47Q96K76 MIR338-201ENST00000636369 67 ntBASIC1.17□□□□□ -2.22
USP47Q96K76 SNORD114-2-201ENST00000363953 78 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 RNU6-17P-201ENST00000384245 107 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 RNU6-18P-201ENST00000384527 107 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 MIR549A-201ENST00000385268 96 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 RNA5SP494-201ENST00000410653 129 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 CST2P1-201ENST00000425770 87 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 AC073464.1-201ENST00000429823 534 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 AC069257.2-201ENST00000441819 155 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms