Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 RNU6-1274P-201ENST00000384557 107 ntBASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 AC006445.1-201ENST00000491925 405 ntBASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 RNU7-6P-201ENST00000516845 62 ntBASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 AC019288.1-201ENST00000557918 224 ntBASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 MIR6868-201ENST00000611215 58 ntBASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 FAM35CP-201ENST00000554755 2470 ntBASIC4.78□□□□□ -1.64
MS4A4AQ96JQ5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 RNU6-675P-201ENST00000384236 104 ntBASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 MIR548O-201ENST00000408583 114 ntBASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 DBIP2-201ENST00000419076 262 ntBASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 AC004941.2-201ENST00000427009 228 ntBASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 RNU7-80P-201ENST00000459562 61 ntBASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 AC110768.1-201ENST00000509222 400 ntBASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 RAC1P2-201ENST00000511164 579 ntBASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 SCGB1D5P-201ENST00000515134 247 ntBASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 MIR4694-201ENST00000578534 80 ntBASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 U7.3-201ENST00000616123 62 ntBASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.77□□□□□ -1.65
MS4A4AQ96JQ5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 MIR126-201ENST00000362291 85 ntBASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 SNORA5A-201ENST00000384111 134 ntBASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 Y_RNA.454-201ENST00000384224 113 ntBASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 RNU6-1104P-201ENST00000384723 104 ntBASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 SNORA11.2-201ENST00000408318 127 ntBASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 SNORA57.3-201ENST00000411095 141 ntBASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 AL139247.1-201ENST00000422768 325 ntBASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 AC009238.1-201ENST00000442165 424 ntBASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 AC009237.6-201ENST00000446969 424 ntBASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 SNORA74D-201ENST00000516404 141 ntBASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 DLEU2_5.2-201ENST00000610606 84 ntBASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
MS4A4AQ96JQ5 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 SNORD116-22-201ENST00000384430 92 ntBASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 MIR491-201ENST00000384877 84 ntBASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 HMGN2P27-201ENST00000427352 270 ntBASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 HMGN2P31-201ENST00000432430 273 ntBASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 HMGN2P16-201ENST00000456802 261 ntBASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 CYCSP30-201ENST00000546447 172 ntBASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 AC015813.6-201ENST00000624409 5808 ntBASIC4.75□□□□□ -1.65
MS4A4AQ96JQ5 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 MAPK10-286ENST00000641208 8747 ntBASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 SNORA33-201ENST00000363664 130 ntBASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 RNU1-96P-201ENST00000364163 162 ntBASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 RNU6-24P-201ENST00000384440 107 ntBASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 MIR34B-201ENST00000385076 84 ntBASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 RPS26P2-201ENST00000440331 348 ntBASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 AC025750.2-201ENST00000442609 450 ntBASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 AC010401.1-201ENST00000463867 348 ntBASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 RN7SL323P-201ENST00000494712 295 ntBASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 RNU7-99P-201ENST00000516271 62 ntBASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 RNU6-586P-201ENST00000517265 104 ntBASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 AC022523.2-201ENST00000561045 150 ntBASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 MIR5684-201ENST00000585074 65 ntBASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 MIR4662A-201ENST00000637499 67 ntBASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms