Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SNORA31.11-201ENST00000516528 139 ntBASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 RNU6-1098P-201ENST00000516772 96 ntBASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 AC020661.2-201ENST00000560114 134 ntBASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 MIR4658-201ENST00000584344 65 ntBASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 VN1R91P-201ENST00000594377 169 ntBASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 AC007485.1-201ENST00000616755 206 ntBASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 AL606534.2-204ENST00000635008 178 ntBASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 MIR4272-201ENST00000635924 64 ntBASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 SNORA63-201ENST00000363450 132 ntBASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 MIR518C-201ENST00000384822 101 ntBASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 MTCO3P19-201ENST00000415864 321 ntBASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 MTND4P19-201ENST00000446659 478 ntBASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 AC009237.7-201ENST00000447357 229 ntBASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 U8.22-201ENST00000459141 133 ntBASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 TRBV12-1-201ENST00000479785 344 ntBASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 AL163540.1-201ENST00000485382 386 ntBASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 SNORA25.10-201ENST00000515926 124 ntBASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 RNU4-77P-201ENST00000516692 156 ntBASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 Y_RNA.711-201ENST00000516993 102 ntBASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 HSBP1P1-201ENST00000555205 166 ntBASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 AC091544.4-201ENST00000555268 342 ntBASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 AL132822.1-201ENST00000617063 513 ntBASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 MIR1248-201ENST00000629190 106 ntBASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP4CQ96CF2 RNU1-62P-201ENST00000362599 164 ntBASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 Y_RNA.179-201ENST00000363844 90 ntBASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 Y_RNA.202-201ENST00000364083 110 ntBASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 RNU1-91P-201ENST00000364746 163 ntBASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 RNU6-281P-201ENST00000384212 103 ntBASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 RNU6-793P-201ENST00000384233 104 ntBASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 RNU6-611P-201ENST00000384276 104 ntBASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 MTCYBP6-201ENST00000441810 138 ntBASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 AC011753.1-201ENST00000451001 220 ntBASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 AC018868.1-201ENST00000491307 315 ntBASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 RNU6-911P-201ENST00000516523 104 ntBASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 RNA5SP490-201ENST00000517141 136 ntBASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 GNAI2P1-201ENST00000541815 315 ntBASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 AL442663.2-201ENST00000554385 511 ntBASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 AC010999.1-201ENST00000611856 324 ntBASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHMP4CQ96CF2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 RNU6-438P-201ENST00000365561 103 ntBASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 RNA5SP181-201ENST00000410246 98 ntBASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 AL160004.2-201ENST00000432935 350 ntBASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 RN7SL429P-201ENST00000479090 223 ntBASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 RN7SL489P-201ENST00000486185 223 ntBASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 RN7SL327P-201ENST00000488659 223 ntBASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 SNORA4.4-201ENST00000515921 135 ntBASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 IGLV3-17-201ENST00000519099 244 ntBASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 AC034114.1-201ENST00000520293 285 ntBASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 AC046143.2-201ENST00000609789 160 ntBASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 AC013412.1-201ENST00000610687 192 ntBASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 RN7SL853P-201ENST00000617250 223 ntBASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 AC138305.3-201ENST00000624988 240 ntBASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHMP4CQ96CF2 ZNF72P-201ENST00000425869 1908 ntBASIC2.9□□□□□ -1.95
CHMP4CQ96CF2 Y_RNA.148-201ENST00000363557 117 ntBASIC2.9□□□□□ -1.95
CHMP4CQ96CF2 SNORA22B-201ENST00000383876 138 ntBASIC2.9□□□□□ -1.95
CHMP4CQ96CF2 RNU6-1001P-201ENST00000411265 100 ntBASIC2.9□□□□□ -1.95
CHMP4CQ96CF2 RNU6-344P-201ENST00000516635 111 ntBASIC2.9□□□□□ -1.95
CHMP4CQ96CF2 RNU1-117P-201ENST00000517041 158 ntBASIC2.9□□□□□ -1.95
CHMP4CQ96CF2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.9□□□□□ -1.95
CHMP4CQ96CF2 MIR4435-1-201ENST00000582552 80 ntBASIC2.9□□□□□ -1.95
CHMP4CQ96CF2 AC125232.2-201ENST00000592457 143 ntBASIC2.9□□□□□ -1.95
CHMP4CQ96CF2 SNORD11B-201ENST00000607707 90 ntBASIC2.9□□□□□ -1.95
CHMP4CQ96CF2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.9□□□□□ -1.95
CHMP4CQ96CF2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CHMP4CQ96CF2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CHMP4CQ96CF2 AC005592.1-201ENST00000566527 1640 ntBASIC2.9□□□□□ -1.95
CHMP4CQ96CF2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 RNU6-727P-201ENST00000363592 107 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 Y_RNA.216-201ENST00000364205 93 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 AC117470.1-201ENST00000381974 330 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 RNA5SP213-201ENST00000391031 106 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 AL033519.2-201ENST00000403958 392 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 AC004866.1-201ENST00000411748 78 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 CR769767.1-201ENST00000436337 346 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 CHEK2P4-201ENST00000450340 246 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms