Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNU6-121P-201ENST00000410525 99 ntBASIC3.25□□□□□ -1.89
RTF1Q92541 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.25□□□□□ -1.89
RTF1Q92541 AC112771.1-201ENST00000463581 102 ntBASIC3.25□□□□□ -1.89
RTF1Q92541 RPS27AP9-201ENST00000477681 438 ntBASIC3.25□□□□□ -1.89
RTF1Q92541 AC008413.1-201ENST00000511864 177 ntBASIC3.25□□□□□ -1.89
RTF1Q92541 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.25□□□□□ -1.89
RTF1Q92541 AC013412.1-201ENST00000610687 192 ntBASIC3.25□□□□□ -1.89
RTF1Q92541 AL359854.1-201ENST00000614203 1594 ntBASIC3.25□□□□□ -1.89
RTF1Q92541 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.24□□□□□ -1.89
RTF1Q92541 Y_RNA.105-201ENST00000363182 111 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 RNA5SP456-201ENST00000364002 114 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 SNORD56.5-201ENST00000364281 72 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 RNU6-245P-201ENST00000384020 107 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 RNU6-1145P-201ENST00000384246 107 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 MIR329-1-201ENST00000385028 80 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 MT-TW-201ENST00000387382 68 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 MIR208B-201ENST00000401172 77 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 AL079342.1-201ENST00000401460 267 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 CBX3P9-201ENST00000402326 552 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 AL359511.1-201ENST00000402970 211 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 RNA5SP201-201ENST00000410316 124 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 SNORD12B-201ENST00000410433 91 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 UBBP3-201ENST00000445497 241 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 Z96811.1-201ENST00000445880 108 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 AL121594.1-201ENST00000475906 575 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 RNU6-1271P-201ENST00000517049 105 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 AL590808.1-201ENST00000618696 141 ntBASIC3.24□□□□□ -1.89
RTF1Q92541 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.23□□□□□ -1.89
RTF1Q92541 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RTF1Q92541 Z82195.2-201ENST00000612348 18351 ntBASIC3.23□□□□□ -1.89
RTF1Q92541 RNA5SP361-201ENST00000362686 118 ntBASIC3.23□□□□□ -1.89
RTF1Q92541 RNU6-1083P-201ENST00000384022 107 ntBASIC3.23□□□□□ -1.89
RTF1Q92541 Y_RNA.476-201ENST00000384347 108 ntBASIC3.23□□□□□ -1.89
RTF1Q92541 RNU6-1001P-201ENST00000411265 100 ntBASIC3.23□□□□□ -1.89
RTF1Q92541 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.23□□□□□ -1.89
RTF1Q92541 RPL23AP70-201ENST00000483361 460 ntBASIC3.23□□□□□ -1.89
RTF1Q92541 SNORA31.6-201ENST00000516241 130 ntBASIC3.23□□□□□ -1.89
RTF1Q92541 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.23□□□□□ -1.89
RTF1Q92541 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.23□□□□□ -1.89
RTF1Q92541 AC023157.2-201ENST00000540596 141 ntBASIC3.23□□□□□ -1.89
RTF1Q92541 AC091544.4-201ENST00000555268 342 ntBASIC3.23□□□□□ -1.89
RTF1Q92541 AC136932.1-201ENST00000574771 208 ntBASIC3.23□□□□□ -1.89
RTF1Q92541 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.23□□□□□ -1.89
RTF1Q92541 MIR376A1-201ENST00000616574 68 ntBASIC3.23□□□□□ -1.89
RTF1Q92541 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.23□□□□□ -1.89
RTF1Q92541 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.23□□□□□ -1.89
RTF1Q92541 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RTF1Q92541 AC026241.1-201ENST00000517873 2142 ntBASIC3.22□□□□□ -1.89
RTF1Q92541 RNU6-873P-201ENST00000363833 107 ntBASIC3.22□□□□□ -1.89
RTF1Q92541 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.22□□□□□ -1.89
RTF1Q92541 Y_RNA.483-201ENST00000384380 101 ntBASIC3.22□□□□□ -1.89
RTF1Q92541 RNU6-1093P-201ENST00000391194 107 ntBASIC3.22□□□□□ -1.89
RTF1Q92541 MIR320B2-201ENST00000408479 138 ntBASIC3.22□□□□□ -1.89
RTF1Q92541 RPL19P1-201ENST00000411635 428 ntBASIC3.22□□□□□ -1.89
RTF1Q92541 AC097463.2-201ENST00000421074 142 ntBASIC3.22□□□□□ -1.89
RTF1Q92541 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.22□□□□□ -1.89
RTF1Q92541 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.22□□□□□ -1.89
RTF1Q92541 SNORD127-201ENST00000458892 86 ntBASIC3.22□□□□□ -1.89
RTF1Q92541 RN7SL636P-201ENST00000497504 294 ntBASIC3.22□□□□□ -1.89
RTF1Q92541 SCARNA11.3-201ENST00000517276 130 ntBASIC3.22□□□□□ -1.89
RTF1Q92541 CYCSP23-201ENST00000519781 313 ntBASIC3.22□□□□□ -1.89
RTF1Q92541 AC023824.2-201ENST00000566185 400 ntBASIC3.22□□□□□ -1.89
RTF1Q92541 MIR4300-201ENST00000581016 96 ntBASIC3.22□□□□□ -1.89
RTF1Q92541 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.22□□□□□ -1.89
RTF1Q92541 PCGEM1.1-201ENST00000613431 131 ntBASIC3.22□□□□□ -1.89
RTF1Q92541 UCA1.1-201ENST00000620952 75 ntBASIC3.22□□□□□ -1.89
RTF1Q92541 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
RTF1Q92541 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RTF1Q92541 RNA5SP289-201ENST00000362332 137 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 RNU4-15P-201ENST00000362613 141 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 Y_RNA.143-201ENST00000363520 106 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 Y_RNA.307-201ENST00000365022 117 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 SNORD63-201ENST00000384262 68 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 Y_RNA.462-201ENST00000384268 102 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 RNA5SP492-201ENST00000411330 114 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 RPL21P38-201ENST00000418090 167 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.21□□□□□ -1.9
RTF1Q92541 AC096920.1-201ENST00000423991 241 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 Z98742.2-201ENST00000431564 187 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.21□□□□□ -1.9
RTF1Q92541 AC108059.2-201ENST00000434626 151 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.21□□□□□ -1.9
RTF1Q92541 RNU6-1132P-201ENST00000459214 107 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 TRBVB-201ENST00000477100 408 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 RNA5SP112-201ENST00000515937 99 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 RNU6-794P-201ENST00000517261 64 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.21□□□□□ -1.9
RTF1Q92541 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.21□□□□□ -1.9
RTF1Q92541 SNORD53-201ENST00000579969 78 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 AC010999.1-201ENST00000611856 324 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 AC011476.5-201ENST00000615594 130 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.21□□□□□ -1.9
RTF1Q92541 ZNF204P-201ENST00000416749 2397 ntBASIC3.2□□□□□ -1.9
RTF1Q92541 AC010615.1-201ENST00000594254 1764 ntBASIC3.2□□□□□ -1.9
RTF1Q92541 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RTF1Q92541 RNU6-378P-201ENST00000384324 107 ntBASIC3.2□□□□□ -1.9
RTF1Q92541 MIR592-201ENST00000384959 97 ntBASIC3.2□□□□□ -1.9
RTF1Q92541 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.2□□□□□ -1.9
RTF1Q92541 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms