Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 MIR586-201ENST00000385035 97 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 SNORD12-201ENST00000391002 90 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 RNU6-482P-201ENST00000391068 107 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 AL031577.2-201ENST00000404133 280 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 RN7SKP200-201ENST00000410564 320 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 AC005840.1-201ENST00000498412 377 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 AC069113.1-201ENST00000517763 267 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 AL137161.1-201ENST00000532231 390 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 AC109446.2-201ENST00000567872 497 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 MTATP6P3-201ENST00000581686 676 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 AC245884.10-201ENST00000597355 337 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 AL513534.2-201ENST00000603836 250 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 AC009229.3-201ENST00000608056 282 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 AL136370.1-201ENST00000608166 691 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 GHRLOS.1-201ENST00000610995 70 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 AC009161.2-201ENST00000624626 138 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 SNORD3E-202ENST00000627253 216 ntBASIC0.44□□□□□ -2.34
MBD3L1Q8WWY6 RNU6-53P-201ENST00000365367 106 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 MIR200A-201ENST00000384875 90 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 MIR450B-201ENST00000401182 78 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 RNU2-29P-201ENST00000410423 189 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 RNU6-1186P-201ENST00000410429 97 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 RNU6-248P-201ENST00000410720 107 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 MTCYBP8-201ENST00000422855 651 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 AC245047.3-201ENST00000429428 127 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 SNRPFP3-201ENST00000457792 225 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 GMFBP1-201ENST00000467831 427 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 AF186996.7-201ENST00000492781 209 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 CCDC34P1-201ENST00000507441 517 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 AC060788.1-201ENST00000521318 469 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 AC068790.2-201ENST00000602601 557 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 AC146944.4-201ENST00000602697 718 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 AC087683.2-201ENST00000611384 326 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 AC016597.2-201ENST00000613256 341 ntBASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.43□□□□□ -2.34
MBD3L1Q8WWY6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 Y_RNA.123-201ENST00000363338 102 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 RNU4-76P-201ENST00000364509 141 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 RNU6-1317P-201ENST00000364582 104 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 RNU6-1080P-201ENST00000383982 107 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 RNU6-950P-201ENST00000384651 107 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 MIR520E-201ENST00000384867 87 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 RNA5SP504-201ENST00000410676 117 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 MTCO3P18-201ENST00000440206 761 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 RNU7-138P-201ENST00000459479 64 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 RNU6-1037P-201ENST00000459571 107 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 SNORD42A-201ENST00000459584 64 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AC007215.1-201ENST00000464893 276 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AC010493.1-201ENST00000513479 292 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 RNU4-54P-201ENST00000516428 129 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 RNU1-117P-201ENST00000517041 158 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AP002963.1-201ENST00000530590 184 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AC016256.1-201ENST00000547971 354 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AC025423.5-201ENST00000550230 219 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 HIF1AP1-201ENST00000553642 175 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AC026470.2-201ENST00000561492 181 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 FRG2DP-202ENST00000566967 323 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 MIR3913-1-201ENST00000577744 102 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AC245014.2-201ENST00000603689 287 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AC246785.4-201ENST00000605374 287 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AP001596.2-201ENST00000608410 312 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AC104465.1-201ENST00000611365 139 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 U2.17-201ENST00000611454 95 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AL359075.3-201ENST00000613288 217 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 AC005858.4-201ENST00000623191 700 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 snoZ196.1-201ENST00000625269 89 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 OR5AK4P-201ENST00000635912 903 ntBASIC0.42□□□□□ -2.34
MBD3L1Q8WWY6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
MBD3L1Q8WWY6 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
MBD3L1Q8WWY6 MIR373-201ENST00000362273 69 ntBASIC0.41□□□□□ -2.34
MBD3L1Q8WWY6 RNU4-21P-201ENST00000362802 126 ntBASIC0.41□□□□□ -2.34
MBD3L1Q8WWY6 RNA5SP126-201ENST00000365092 109 ntBASIC0.41□□□□□ -2.34
MBD3L1Q8WWY6 RNU6-1240P-201ENST00000365155 104 ntBASIC0.41□□□□□ -2.34
MBD3L1Q8WWY6 RNU6-1286P-201ENST00000383871 107 ntBASIC0.41□□□□□ -2.34
MBD3L1Q8WWY6 MIR660-201ENST00000385235 97 ntBASIC0.41□□□□□ -2.34
MBD3L1Q8WWY6 MIR653-201ENST00000385279 96 ntBASIC0.41□□□□□ -2.34
MBD3L1Q8WWY6 MIR942-201ENST00000401111 86 ntBASIC0.41□□□□□ -2.34
MBD3L1Q8WWY6 MRPL42P3-201ENST00000401492 326 ntBASIC0.41□□□□□ -2.34
MBD3L1Q8WWY6 RPS26P42-201ENST00000413485 326 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms