Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RNU2-48P-201ENST00000410694 191 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 MTND1P14-201ENST00000427400 950 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 MTCO2P12-201ENST00000427426 682 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 USP9YP16-201ENST00000430287 407 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 USP9YP23-201ENST00000455085 407 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 AP000870.1-201ENST00000472927 406 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 AC018868.1-201ENST00000491307 315 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 AC105758.1-201ENST00000506038 399 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-1114P-201ENST00000516022 107 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 RNA5SP200-201ENST00000516360 103 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 MIR2355-201ENST00000517199 87 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 HSPE1P18-201ENST00000517602 280 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 AC090517.1-201ENST00000569307 266 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 AC090617.3-201ENST00000573670 475 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 MIR4719-201ENST00000585233 84 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 SNRPGP17-201ENST00000603780 214 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 MIR1244-1-201ENST00000612829 85 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 AC005562.2-201ENST00000618264 111 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 MIR1244-3-201ENST00000635744 85 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 MIR1244-2-201ENST00000636449 85 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 MIR1244-4-202ENST00000636813 85 ntBASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SLC44A1Q8WWI5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 Y_RNA.445-201ENST00000384168 102 ntBASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-541P-201ENST00000384709 110 ntBASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 MIR487A-201ENST00000385009 80 ntBASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 MIR10B-201ENST00000385011 110 ntBASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 RNU2-32P-201ENST00000411193 191 ntBASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 OOSP1P1-201ENST00000423265 274 ntBASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 MTCYBP6-201ENST00000441810 138 ntBASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 AC007677.1-201ENST00000445757 515 ntBASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-717P-201ENST00000459076 104 ntBASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 Y_RNA.631-201ENST00000459607 101 ntBASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 MIR514B-201ENST00000516774 80 ntBASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 AC144568.1-201ENST00000520139 137 ntBASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 MIR3124-201ENST00000582636 67 ntBASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 TCL6_2.1-201ENST00000615162 119 ntBASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 AL132822.1-201ENST00000617063 513 ntBASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.18□□□□□ -2.06
SLC44A1Q8WWI5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 MTND5P16-201ENST00000460269 1703 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 Y_RNA.138-201ENST00000363462 102 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 SNORA3A-201ENST00000364113 130 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-280P-201ENST00000364145 104 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 RNU4-42P-201ENST00000364738 142 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-234P-201ENST00000365229 104 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 SNORA25B-201ENST00000365507 128 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-1227P-201ENST00000383981 107 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-474P-201ENST00000384243 107 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 SNORA69.1-201ENST00000390904 137 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 MIR1302-11-201ENST00000408051 138 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 MIR548P-201ENST00000408336 84 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 MIR1302-9-201ENST00000408365 138 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 MIR1302-10-201ENST00000408734 138 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 Y_RNA.592-201ENST00000410274 109 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 AC096638.1-201ENST00000444678 216 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 IFNA11P-201ENST00000446352 526 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 RPL23AP7-203ENST00000449021 469 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 AL021397.1-201ENST00000451806 248 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-911P-201ENST00000516523 104 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 DEFB131C-201ENST00000528817 165 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 MIR1302-2-201ENST00000607096 138 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 AC064859.1-201ENST00000624741 174 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 AC138305.3-201ENST00000624988 240 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SLC44A1Q8WWI5 ZNF658B-202ENST00000615961 3375 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 ZNF204P-201ENST00000416749 2397 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-222P-201ENST00000362438 107 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 RNU1-91P-201ENST00000364746 163 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 RNU4-52P-201ENST00000384209 138 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 RNU6-611P-201ENST00000384276 104 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 SNORA3.2-201ENST00000408221 125 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 RNA5SP338-201ENST00000410495 85 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 RNU4-53P-201ENST00000410828 140 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 PMCHL1-202ENST00000423102 261 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 EIF1P2-201ENST00000428233 350 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 AC009238.1-201ENST00000442165 424 ntBASIC2.16□□□□□ -2.06
SLC44A1Q8WWI5 AC009237.6-201ENST00000446969 424 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms