Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AC005562.2-201ENST00000618264 111 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 MIR7157-201ENST00000635801 60 ntBASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CCHCR1Q8TD31 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 AL161431.1-201ENST00000618966 4205 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 Y_RNA.84-201ENST00000363011 104 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 RNU6-961P-201ENST00000363893 105 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 SNORA25.6-201ENST00000364121 118 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 SNORD32B-201ENST00000364460 84 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 MIR215-201ENST00000384858 110 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 MIR627-201ENST00000384979 97 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 Y_RNA.581-201ENST00000391017 97 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 RNU6-1203P-201ENST00000410703 110 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 RPL30P4-201ENST00000429309 333 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 ARL5AP4-201ENST00000430731 512 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 AC073901.1-201ENST00000462471 408 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 TRBVB-201ENST00000477100 408 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 AC074133.1-201ENST00000515696 183 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 SCARNA3-201ENST00000517097 143 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 AC005000.2-201ENST00000605468 310 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 TCL6_2.1-201ENST00000615162 119 ntBASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CCHCR1Q8TD31 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 Y_RNA.307-201ENST00000365022 117 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 Y_RNA.562-201ENST00000384695 113 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 RNU2-20P-201ENST00000410425 191 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 AC004866.1-201ENST00000411748 78 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 EEF1A1P41-201ENST00000414667 207 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 AC139712.2-201ENST00000424302 339 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 IFNA11P-201ENST00000446352 526 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 RNU6-1132P-201ENST00000459214 107 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 RNU6-344P-201ENST00000516635 111 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 RNU6-570P-201ENST00000517051 105 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 RN7SKP40-201ENST00000517211 242 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 AK6P2-201ENST00000549020 471 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 AL713866.2-201ENST00000603579 219 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 AL670379.2-201ENST00000604983 252 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 RPL17P51-201ENST00000605218 238 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 AC010297.1-201ENST00000623948 149 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 AC010615.1-201ENST00000594254 1764 ntBASIC2.92□□□□□ -1.94
CCHCR1Q8TD31 AC092593.1-201ENST00000515413 1815 ntBASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 RNU6-626P-201ENST00000363354 107 ntBASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 Y_RNA.230-201ENST00000364348 109 ntBASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 SNORA12-201ENST00000391162 147 ntBASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 ELOCP21-201ENST00000412558 336 ntBASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 AC096920.1-201ENST00000423991 241 ntBASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 AC027124.2-201ENST00000428249 105 ntBASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 AC004386.2-201ENST00000441858 148 ntBASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 RPS23P5-201ENST00000495419 428 ntBASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 RNU6-496P-201ENST00000516145 99 ntBASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 RNU6-1271P-201ENST00000517049 105 ntBASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 RRN3P3-201ENST00000549207 578 ntBASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 AP001282.2-201ENST00000616149 309 ntBASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.91□□□□□ -1.94
CCHCR1Q8TD31 SNORD81.1-201ENST00000363064 77 ntBASIC2.9□□□□□ -1.95
CCHCR1Q8TD31 SNORD113-8-201ENST00000363497 74 ntBASIC2.9□□□□□ -1.95
CCHCR1Q8TD31 RNU6-20P-201ENST00000384106 107 ntBASIC2.9□□□□□ -1.95
CCHCR1Q8TD31 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCHCR1Q8TD31 RNU5A-5P-201ENST00000411054 116 ntBASIC2.9□□□□□ -1.95
CCHCR1Q8TD31 AC009237.7-201ENST00000447357 229 ntBASIC2.9□□□□□ -1.95
CCHCR1Q8TD31 AC080013.2-201ENST00000460866 323 ntBASIC2.9□□□□□ -1.95
CCHCR1Q8TD31 AC003982.1-202ENST00000469928 248 ntBASIC2.9□□□□□ -1.95
CCHCR1Q8TD31 AC140059.1-201ENST00000489238 361 ntBASIC2.9□□□□□ -1.95
CCHCR1Q8TD31 HSPE1P18-201ENST00000517602 280 ntBASIC2.9□□□□□ -1.95
CCHCR1Q8TD31 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.9□□□□□ -1.95
CCHCR1Q8TD31 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.9□□□□□ -1.95
CCHCR1Q8TD31 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.9□□□□□ -1.95
CCHCR1Q8TD31 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CCHCR1Q8TD31 AC080128.1-201ENST00000474389 1917 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 MIR335-201ENST00000362173 94 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 Y_RNA.14-201ENST00000362415 103 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 DEFA7P-201ENST00000382676 285 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 SNORA18.2-201ENST00000383865 132 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 Y_RNA.447-201ENST00000384184 113 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 SNORA44-201ENST00000384584 132 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 Y_RNA.570-201ENST00000384750 101 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 RNU2-38P-201ENST00000410856 79 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 Z92545.1-201ENST00000411782 234 ntBASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.89□□□□□ -1.95
CCHCR1Q8TD31 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms