Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MIR3690-201ENST00000580266 75 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 MIR4286-201ENST00000580651 93 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 MIR7702-201ENST00000621931 59 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 AC010889.1-201ENST00000566193 2666 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCUBE3Q8IX30 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCUBE3Q8IX30 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.35□□□□□ -1.71
SCUBE3Q8IX30 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCUBE3Q8IX30 CRYBB2P1-203ENST00000415709 538 ntBASIC4.35□□□□□ -1.71
SCUBE3Q8IX30 SNORD115-40-201ENST00000606510 82 ntBASIC4.35□□□□□ -1.71
SCUBE3Q8IX30 AL110115.1-201ENST00000614396 364 ntBASIC4.35□□□□□ -1.71
SCUBE3Q8IX30 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.35□□□□□ -1.71
SCUBE3Q8IX30 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCUBE3Q8IX30 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCUBE3Q8IX30 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCUBE3Q8IX30 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
SCUBE3Q8IX30 AC010680.1-201ENST00000590024 3590 ntBASIC4.34□□□□□ -1.71
SCUBE3Q8IX30 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.34□□□□□ -1.71
SCUBE3Q8IX30 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCUBE3Q8IX30 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
SCUBE3Q8IX30 Y_RNA.198-201ENST00000364013 98 ntBASIC4.34□□□□□ -1.71
SCUBE3Q8IX30 RNU2-49P-201ENST00000410666 184 ntBASIC4.34□□□□□ -1.71
SCUBE3Q8IX30 RNA5SP310-201ENST00000459084 116 ntBASIC4.34□□□□□ -1.71
SCUBE3Q8IX30 RN7SKP289-201ENST00000517244 295 ntBASIC4.34□□□□□ -1.71
SCUBE3Q8IX30 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.34□□□□□ -1.71
SCUBE3Q8IX30 AC134878.1-201ENST00000619901 243 ntBASIC4.34□□□□□ -1.71
SCUBE3Q8IX30 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.34□□□□□ -1.71
SCUBE3Q8IX30 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.34□□□□□ -1.72
SCUBE3Q8IX30 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 Y_RNA.78-201ENST00000362970 110 ntBASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 CYCSP19-201ENST00000411715 316 ntBASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 AC069285.2-201ENST00000440210 275 ntBASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 AC093663.1-201ENST00000497190 394 ntBASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 AL161912.2-201ENST00000565707 3007 ntBASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCUBE3Q8IX30 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 AC016588.2-201ENST00000632484 3021 ntBASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 Y_RNA.362-201ENST00000365518 110 ntBASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 MIR200C-201ENST00000384980 68 ntBASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 RPS4XP11-201ENST00000446897 772 ntBASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 PRSS3P4-201ENST00000453323 162 ntBASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 AC096725.1-201ENST00000514266 313 ntBASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 RNU6-1149P-201ENST00000516810 97 ntBASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 AC068339.1-201ENST00000526965 141 ntBASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 JPX_2.1-201ENST00000614161 69 ntBASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 MIR7151-201ENST00000617477 60 ntBASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 MALAT1.1-201ENST00000618249 95 ntBASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 AC009487.4-201ENST00000624969 3585 ntBASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 Z82217.1-201ENST00000625157 8149 ntBASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCUBE3Q8IX30 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 SNORA71.3-201ENST00000362582 128 ntBASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 SNORA31-201ENST00000362607 130 ntBASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 RNA5SP513-201ENST00000364648 118 ntBASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 RNA5SP283-201ENST00000365604 119 ntBASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 AC016717.1-201ENST00000448918 286 ntBASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 RPS27P22-201ENST00000478056 241 ntBASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 RPL36AP48-201ENST00000485521 314 ntBASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 AC023141.12-201ENST00000512399 199 ntBASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 AC011406.1-201ENST00000512440 370 ntBASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 RNU7-143P-201ENST00000516781 65 ntBASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 IGKV3-31-201ENST00000523109 329 ntBASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 AC011604.1-201ENST00000545978 196 ntBASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 AC011266.1-201ENST00000624119 3569 ntBASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCUBE3Q8IX30 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SCUBE3Q8IX30 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SCUBE3Q8IX30 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.3□□□□□ -1.72
SCUBE3Q8IX30 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SCUBE3Q8IX30 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
SCUBE3Q8IX30 AC006504.1-201ENST00000562493 3666 ntBASIC4.3□□□□□ -1.72
SCUBE3Q8IX30 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SCUBE3Q8IX30 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.3□□□□□ -1.72
SCUBE3Q8IX30 MIR494-201ENST00000349529 81 ntBASIC4.3□□□□□ -1.72
SCUBE3Q8IX30 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.3□□□□□ -1.72
SCUBE3Q8IX30 RNA5SP130-201ENST00000364431 114 ntBASIC4.3□□□□□ -1.72
SCUBE3Q8IX30 MIR449B-201ENST00000384995 97 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms