Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 SNORA12-201ENST00000391162 147 ntBASIC2.34□□□□□ -2.03
DHX40Q8IX18 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.34□□□□□ -2.03
DHX40Q8IX18 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.34□□□□□ -2.03
DHX40Q8IX18 AC099799.1-201ENST00000439809 192 ntBASIC2.34□□□□□ -2.03
DHX40Q8IX18 AC009238.1-201ENST00000442165 424 ntBASIC2.34□□□□□ -2.03
DHX40Q8IX18 AC009237.6-201ENST00000446969 424 ntBASIC2.34□□□□□ -2.03
DHX40Q8IX18 AC018868.1-201ENST00000491307 315 ntBASIC2.34□□□□□ -2.03
DHX40Q8IX18 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.34□□□□□ -2.03
DHX40Q8IX18 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.34□□□□□ -2.03
DHX40Q8IX18 HMGB3P3-201ENST00000510526 400 ntBASIC2.34□□□□□ -2.03
DHX40Q8IX18 RNU6-58P-201ENST00000517143 103 ntBASIC2.34□□□□□ -2.03
DHX40Q8IX18 AC027288.2-201ENST00000553028 243 ntBASIC2.34□□□□□ -2.03
DHX40Q8IX18 AC090517.1-201ENST00000569307 266 ntBASIC2.34□□□□□ -2.03
DHX40Q8IX18 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
DHX40Q8IX18 SNRPGP20-201ENST00000604477 205 ntBASIC2.34□□□□□ -2.03
DHX40Q8IX18 AL355802.3-201ENST00000607571 545 ntBASIC2.34□□□□□ -2.03
DHX40Q8IX18 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
DHX40Q8IX18 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
DHX40Q8IX18 AC006026.1-201ENST00000444025 1803 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 RNU6-1115P-201ENST00000362490 106 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 RNU5F-3P-201ENST00000363767 117 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 RNA5SP99-201ENST00000364020 114 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 SNORA25B-201ENST00000365507 128 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 RNU6-245P-201ENST00000384020 107 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 RNU6-611P-201ENST00000384276 104 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.33□□□□□ -2.04
DHX40Q8IX18 AC096638.1-201ENST00000444678 216 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 AL035666.1-201ENST00000446195 348 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 TOMM22P6-201ENST00000465035 409 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.33□□□□□ -2.04
DHX40Q8IX18 RNU6-976P-201ENST00000516086 111 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 RNU1-40P-201ENST00000516816 164 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 RNU1-97P-201ENST00000516872 164 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 RNU7-4P-201ENST00000516961 62 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.33□□□□□ -2.04
DHX40Q8IX18 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.33□□□□□ -2.04
DHX40Q8IX18 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.33□□□□□ -2.04
DHX40Q8IX18 AC016727.2-201ENST00000603988 621 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 AL132822.1-201ENST00000617063 513 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 AC005562.2-201ENST00000618264 111 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 MIR6873-201ENST00000622788 63 ntBASIC2.33□□□□□ -2.04
DHX40Q8IX18 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
DHX40Q8IX18 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
DHX40Q8IX18 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
DHX40Q8IX18 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
DHX40Q8IX18 RNU1-76P-201ENST00000362903 159 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 Y_RNA.197-201ENST00000364004 102 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 RNU6-99P-201ENST00000364721 107 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 Y_RNA.364-201ENST00000365532 101 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 Y_RNA.463-201ENST00000384271 102 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 RNU6-541P-201ENST00000384709 110 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 MIR625-201ENST00000385047 85 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 RNU6-159P-201ENST00000391080 106 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 RNU1-139P-201ENST00000391307 165 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 RNU2-48P-201ENST00000410694 191 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 AC011753.1-201ENST00000451001 220 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 Y_RNA.639-201ENST00000458981 102 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 AC027575.1-201ENST00000481064 460 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 AC034114.1-201ENST00000520293 285 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 NDUFA5P6-201ENST00000542110 379 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.32□□□□□ -2.04
DHX40Q8IX18 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.32□□□□□ -2.04
DHX40Q8IX18 AC002984.1-201ENST00000591692 448 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.32□□□□□ -2.04
DHX40Q8IX18 AL080274.1-201ENST00000605565 220 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 TCL6_2.1-201ENST00000615162 119 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 AL359314.1-201ENST00000616913 261 ntBASIC2.32□□□□□ -2.04
DHX40Q8IX18 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
DHX40Q8IX18 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
DHX40Q8IX18 Y_RNA.106-201ENST00000363189 100 ntBASIC2.31□□□□□ -2.04
DHX40Q8IX18 RNU6-280P-201ENST00000364145 104 ntBASIC2.31□□□□□ -2.04
DHX40Q8IX18 RNU6-234P-201ENST00000365229 104 ntBASIC2.31□□□□□ -2.04
DHX40Q8IX18 Y_RNA.395-201ENST00000383945 109 ntBASIC2.31□□□□□ -2.04
DHX40Q8IX18 Y_RNA.419-201ENST00000384041 102 ntBASIC2.31□□□□□ -2.04
DHX40Q8IX18 RNU1-148P-201ENST00000384472 162 ntBASIC2.31□□□□□ -2.04
DHX40Q8IX18 RNU6-1156P-201ENST00000410365 100 ntBASIC2.31□□□□□ -2.04
DHX40Q8IX18 AC092423.1-201ENST00000430165 186 ntBASIC2.31□□□□□ -2.04
DHX40Q8IX18 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.31□□□□□ -2.04
DHX40Q8IX18 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.31□□□□□ -2.04
DHX40Q8IX18 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.31□□□□□ -2.04
DHX40Q8IX18 AC121758.2-201ENST00000553271 193 ntBASIC2.31□□□□□ -2.04
DHX40Q8IX18 AC009127.3-201ENST00000570531 403 ntBASIC2.31□□□□□ -2.04
DHX40Q8IX18 SNORD14A-201ENST00000606526 91 ntBASIC2.31□□□□□ -2.04
DHX40Q8IX18 AL353997.5-201ENST00000618886 171 ntBASIC2.31□□□□□ -2.04
DHX40Q8IX18 AC090971.5-201ENST00000621102 293 ntBASIC2.31□□□□□ -2.04
DHX40Q8IX18 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
DHX40Q8IX18 MTND4P1-201ENST00000457501 1466 ntBASIC2.31□□□□□ -2.04
DHX40Q8IX18 Y_RNA.252-201ENST00000364556 101 ntBASIC2.3□□□□□ -2.04
DHX40Q8IX18 SNORD42.2-201ENST00000365570 69 ntBASIC2.3□□□□□ -2.04
DHX40Q8IX18 Y_RNA.428-201ENST00000384078 102 ntBASIC2.3□□□□□ -2.04
DHX40Q8IX18 MIR487A-201ENST00000385009 80 ntBASIC2.3□□□□□ -2.04
DHX40Q8IX18 AL139156.1-201ENST00000412785 841 ntBASIC2.3□□□□□ -2.04
DHX40Q8IX18 AC027124.2-201ENST00000428249 105 ntBASIC2.3□□□□□ -2.04
DHX40Q8IX18 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.3□□□□□ -2.04
DHX40Q8IX18 USP9YP16-201ENST00000430287 407 ntBASIC2.3□□□□□ -2.04
DHX40Q8IX18 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.3□□□□□ -2.04
DHX40Q8IX18 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.3□□□□□ -2.04
DHX40Q8IX18 USP9YP23-201ENST00000455085 407 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms