Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 Y_RNA.124-201ENST00000363339 93 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 RN7SKP284-201ENST00000411002 343 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 CYCSP49-201ENST00000420810 319 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 AC097463.2-201ENST00000421074 142 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 EIF4EP4-201ENST00000424916 578 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 Y_RNA.651-201ENST00000459380 103 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 RN7SL585P-201ENST00000470538 280 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 AC006445.1-201ENST00000491925 405 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 RNU6-711P-201ENST00000517255 106 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.18□□□□□ -1.74
RNF135Q8IUD6 AC087499.8-201ENST00000578406 226 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 MIR4513-201ENST00000581077 86 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 AC008739.2-201ENST00000597006 317 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.18□□□□□ -1.74
RNF135Q8IUD6 MIR548AY-201ENST00000617669 107 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 MIR3651-201ENST00000630427 90 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 AC008555.8-201ENST00000623602 2168 ntBASIC4.18□□□□□ -1.74
RNF135Q8IUD6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.18□□□□□ -1.74
RNF135Q8IUD6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.18□□□□□ -1.74
RNF135Q8IUD6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
RNF135Q8IUD6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF135Q8IUD6 Y_RNA.35-201ENST00000362601 101 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 SNORD35B-201ENST00000363660 87 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 RNU6-1082P-201ENST00000364574 107 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 RNU6-32P-201ENST00000383948 107 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 RNU6-13P-201ENST00000384248 107 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 SNORD116-21-201ENST00000384507 92 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 RNU6-12P-201ENST00000384604 107 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 RNU6-41P-201ENST00000384741 107 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 MIR29B2-201ENST00000385055 81 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 Y_RNA.584-201ENST00000391090 114 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 MIR873-201ENST00000401120 77 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 SNORA3.3-201ENST00000408712 125 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 AL035423.1-201ENST00000420331 213 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 RPL23AP7-203ENST00000449021 469 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 CYCSP35-201ENST00000451978 304 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 CENPBD1P1-201ENST00000464061 469 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 AC106707.2-201ENST00000484182 374 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 AC117454.1-201ENST00000491120 168 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 AC104619.4-201ENST00000510773 249 ntBASIC4.17□□□□□ -1.74
RNF135Q8IUD6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF135Q8IUD6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF135Q8IUD6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF135Q8IUD6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RNF135Q8IUD6 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF135Q8IUD6 AL139095.1-201ENST00000404326 391 ntBASIC4.16□□□□□ -1.74
RNF135Q8IUD6 Y_RNA.630-201ENST00000411370 108 ntBASIC4.16□□□□□ -1.74
RNF135Q8IUD6 BX510359.1-201ENST00000456973 237 ntBASIC4.16□□□□□ -1.74
RNF135Q8IUD6 AC025554.1-201ENST00000505641 188 ntBASIC4.16□□□□□ -1.74
RNF135Q8IUD6 RPL23AP94-201ENST00000512518 302 ntBASIC4.16□□□□□ -1.74
RNF135Q8IUD6 RNU7-115P-201ENST00000516433 55 ntBASIC4.16□□□□□ -1.74
RNF135Q8IUD6 RN7SKP57-201ENST00000517248 293 ntBASIC4.16□□□□□ -1.74
RNF135Q8IUD6 AC090142.3-201ENST00000519012 385 ntBASIC4.16□□□□□ -1.74
RNF135Q8IUD6 MIR5684-201ENST00000585074 65 ntBASIC4.16□□□□□ -1.74
RNF135Q8IUD6 RPL30P11-203ENST00000598995 310 ntBASIC4.16□□□□□ -1.74
RNF135Q8IUD6 AC090517.3-201ENST00000625170 141 ntBASIC4.16□□□□□ -1.74
RNF135Q8IUD6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.16□□□□□ -1.74
RNF135Q8IUD6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RNF135Q8IUD6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF135Q8IUD6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF135Q8IUD6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF135Q8IUD6 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RNF135Q8IUD6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RNF135Q8IUD6 MIR450A1-201ENST00000362262 91 ntBASIC4.15□□□□□ -1.75
RNF135Q8IUD6 Y_RNA.280-201ENST00000364765 112 ntBASIC4.15□□□□□ -1.75
RNF135Q8IUD6 SNORA48.2-201ENST00000390926 124 ntBASIC4.15□□□□□ -1.75
RNF135Q8IUD6 RNY4P30-201ENST00000410216 95 ntBASIC4.15□□□□□ -1.75
RNF135Q8IUD6 RNU4-43P-201ENST00000410628 137 ntBASIC4.15□□□□□ -1.75
RNF135Q8IUD6 RNU6-383P-201ENST00000410864 94 ntBASIC4.15□□□□□ -1.75
RNF135Q8IUD6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF135Q8IUD6 AL049873.1-201ENST00000480540 376 ntBASIC4.15□□□□□ -1.75
RNF135Q8IUD6 RPL31P61-201ENST00000496160 376 ntBASIC4.15□□□□□ -1.75
RNF135Q8IUD6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF135Q8IUD6 AC133485.4-201ENST00000561835 220 ntBASIC4.15□□□□□ -1.75
RNF135Q8IUD6 AC138907.4-201ENST00000570107 226 ntBASIC4.15□□□□□ -1.75
RNF135Q8IUD6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF135Q8IUD6 AC012531.5-201ENST00000611375 151 ntBASIC4.15□□□□□ -1.75
RNF135Q8IUD6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF135Q8IUD6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF135Q8IUD6 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RNF135Q8IUD6 AL159152.1-201ENST00000635019 2587 ntBASIC4.15□□□□□ -1.75
RNF135Q8IUD6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RNF135Q8IUD6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.15□□□□□ -1.75
RNF135Q8IUD6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF135Q8IUD6 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
RNF135Q8IUD6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RNF135Q8IUD6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF135Q8IUD6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF135Q8IUD6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF135Q8IUD6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF135Q8IUD6 SNORD74.4-201ENST00000364129 80 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 MIR518C-201ENST00000384822 101 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 MIR93-201ENST00000385024 80 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 AL512604.1-201ENST00000404812 257 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 AL355796.1-201ENST00000406706 323 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 MIR1283-1-201ENST00000408494 87 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 SNORA36B-201ENST00000410438 131 ntBASIC4.14□□□□□ -1.75
RNF135Q8IUD6 AL121890.1-201ENST00000435457 205 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms