Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RPL23AP50-201ENST00000434149 455 ntBASIC2.03□□□□□ -2.08
LDB1Q86U70 AC096638.1-201ENST00000444678 216 ntBASIC2.03□□□□□ -2.08
LDB1Q86U70 AC079804.2-201ENST00000490376 200 ntBASIC2.03□□□□□ -2.08
LDB1Q86U70 SCARNA16.2-201ENST00000516520 172 ntBASIC2.03□□□□□ -2.08
LDB1Q86U70 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.03□□□□□ -2.08
LDB1Q86U70 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.03□□□□□ -2.08
LDB1Q86U70 AC002984.1-201ENST00000591692 448 ntBASIC2.03□□□□□ -2.08
LDB1Q86U70 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.03□□□□□ -2.08
LDB1Q86U70 AC131280.1-202ENST00000624067 4211 ntBASIC2.03□□□□□ -2.08
LDB1Q86U70 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
LDB1Q86U70 SNORA16B-201ENST00000364674 135 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 Y_RNA.384-201ENST00000383909 102 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 Y_RNA.387-201ENST00000383918 102 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 RNU6-159P-201ENST00000391080 106 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
LDB1Q86U70 RNA5SP450-201ENST00000411206 102 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 AC004866.1-201ENST00000411748 78 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
LDB1Q86U70 OOSP1P1-201ENST00000423265 274 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 AL353997.1-201ENST00000432936 108 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 MTATP6P23-201ENST00000440153 476 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.02□□□□□ -2.09
LDB1Q86U70 RNU1-131P-201ENST00000458943 161 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 AC025033.1-201ENST00000463883 194 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 AC090255.1-201ENST00000495779 349 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 AC097473.1-201ENST00000508142 408 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 FGF7P4-201ENST00000509595 295 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.02□□□□□ -2.09
LDB1Q86U70 RNU6-277P-201ENST00000516272 106 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 SNORA25.14-201ENST00000516481 132 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 RNU6-344P-201ENST00000516635 111 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 RNU6-1213P-201ENST00000517075 94 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 APOOP3-201ENST00000536787 586 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 RRN3P3-201ENST00000549207 578 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 MIR3945-201ENST00000581853 98 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 MIR4753-201ENST00000585119 83 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.02□□□□□ -2.09
LDB1Q86U70 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.02□□□□□ -2.09
LDB1Q86U70 MIR1302-1-201ENST00000637932 143 ntBASIC2.02□□□□□ -2.09
LDB1Q86U70 RNU6-23P-201ENST00000363283 107 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 RNU6-873P-201ENST00000363833 107 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 Y_RNA.263-201ENST00000364659 114 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 RNU6-1297P-201ENST00000384415 104 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 RNU2-2P-201ENST00000410396 191 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 RNU2-40P-201ENST00000410833 196 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 MTND4LP11-201ENST00000422184 280 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 AC139712.2-201ENST00000424302 339 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 MTND3P23-201ENST00000431980 347 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 HMGN2P3-201ENST00000433603 273 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 HMGN2P5-201ENST00000436882 273 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.01□□□□□ -2.09
LDB1Q86U70 AP000870.1-201ENST00000472927 406 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 RPS27P21-201ENST00000486977 252 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 RPL17P19-201ENST00000489069 552 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 AC093303.1-201ENST00000514549 295 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 RNU6-507P-201ENST00000516045 100 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 RNU1-41P-201ENST00000516161 162 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 RNU1-48P-201ENST00000516400 162 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 RNU1-40P-201ENST00000516816 164 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 RNU1-97P-201ENST00000516872 164 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 MIR5089-201ENST00000580047 84 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.01□□□□□ -2.09
LDB1Q86U70 U2.15-201ENST00000611544 191 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 U2.16-201ENST00000613119 191 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 U2.12-201ENST00000613778 191 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 U2.20-201ENST00000613956 192 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 U2.9-201ENST00000615427 191 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 U2.11-201ENST00000616345 191 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 U2.2-201ENST00000616535 191 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 U2.3-201ENST00000617785 191 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 U2.19-201ENST00000618602 191 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 RNU2-1-201ENST00000618664 191 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 U2.6-201ENST00000619225 191 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 U2.5-201ENST00000619465 191 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 U2.10-201ENST00000620268 191 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 AL359851.1-201ENST00000569460 4997 ntBASIC2.01□□□□□ -2.09
LDB1Q86U70 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
LDB1Q86U70 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.01□□□□□ -2.09
LDB1Q86U70 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2□□□□□ -2.09
LDB1Q86U70 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2□□□□□ -2.09
LDB1Q86U70 RNA5SP493-201ENST00000364115 91 ntBASIC2□□□□□ -2.09
LDB1Q86U70 SNORD114-6-201ENST00000364393 72 ntBASIC2□□□□□ -2.09
LDB1Q86U70 RNU4-52P-201ENST00000384209 138 ntBASIC2□□□□□ -2.09
LDB1Q86U70 MIR190B-201ENST00000401119 79 ntBASIC2□□□□□ -2.09
LDB1Q86U70 Y_RNA.646-201ENST00000410980 101 ntBASIC2□□□□□ -2.09
LDB1Q86U70 AC007098.1-201ENST00000420122 367 ntBASIC2□□□□□ -2.09
LDB1Q86U70 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2□□□□□ -2.09
LDB1Q86U70 MTND2P29-201ENST00000438595 412 ntBASIC2□□□□□ -2.09
LDB1Q86U70 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2□□□□□ -2.09
LDB1Q86U70 MTCO1P44-201ENST00000441935 243 ntBASIC2□□□□□ -2.09
LDB1Q86U70 Y_RNA.653-201ENST00000459091 95 ntBASIC2□□□□□ -2.09
LDB1Q86U70 AC114982.1-201ENST00000469402 321 ntBASIC2□□□□□ -2.09
LDB1Q86U70 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2□□□□□ -2.09
LDB1Q86U70 AP005660.1-201ENST00000522972 293 ntBASIC2□□□□□ -2.09
LDB1Q86U70 UBL5P4-201ENST00000562584 236 ntBASIC2□□□□□ -2.09
LDB1Q86U70 FRG2DP-202ENST00000566967 323 ntBASIC2□□□□□ -2.09
LDB1Q86U70 MIR3169-201ENST00000578032 83 ntBASIC2□□□□□ -2.09
LDB1Q86U70 MIR4648-201ENST00000580107 72 ntBASIC2□□□□□ -2.09
LDB1Q86U70 CYP2C61P-201ENST00000604072 290 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms