Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-1.09□□□□□ -2.58
LINC00643Q86TS7 MIR4753-201ENST00000585119 83 ntBASIC-1.09□□□□□ -2.58
LINC00643Q86TS7 AL117336.2-201ENST00000602435 335 ntBASIC-1.09□□□□□ -2.58
LINC00643Q86TS7 RNU6-652P-201ENST00000365488 107 ntBASIC-1.1□□□□□ -2.59
LINC00643Q86TS7 MIR193B-201ENST00000384907 83 ntBASIC-1.1□□□□□ -2.59
LINC00643Q86TS7 AC104563.1-201ENST00000476147 376 ntBASIC-1.1□□□□□ -2.59
LINC00643Q86TS7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-1.1□□□□□ -2.59
LINC00643Q86TS7 DEFB130C-202ENST00000530001 230 ntBASIC-1.1□□□□□ -2.59
LINC00643Q86TS7 AC087883.1-201ENST00000551882 391 ntBASIC-1.1□□□□□ -2.59
LINC00643Q86TS7 AC078795.3-201ENST00000602913 472 ntBASIC-1.1□□□□□ -2.59
LINC00643Q86TS7 RNU6-161P-201ENST00000363051 106 ntBASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 RNU6-353P-201ENST00000364266 108 ntBASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 MIR526A1-201ENST00000384897 85 ntBASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 MTND4P32-201ENST00000437189 1237 ntBASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 RNU7-41P-201ENST00000515917 61 ntBASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 AC090517.1-201ENST00000569307 266 ntBASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 MIR4804-201ENST00000581683 73 ntBASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 AC005730.3-201ENST00000583067 366 ntBASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 Z99497.2-201ENST00000603634 310 ntBASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 AC124016.2-201ENST00000610058 665 ntBASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 MIR6734-201ENST00000621166 68 ntBASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 AC112204.3-201ENST00000623822 332 ntBASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 AL162726.3-218ENST00000636401 95 ntBASIC-1.11□□□□□ -2.59
LINC00643Q86TS7 Y_RNA.168-201ENST00000363740 102 ntBASIC-1.12□□□□□ -2.59
LINC00643Q86TS7 SNORD49B-201ENST00000365172 72 ntBASIC-1.12□□□□□ -2.59
LINC00643Q86TS7 Y_RNA.336-201ENST00000365307 109 ntBASIC-1.12□□□□□ -2.59
LINC00643Q86TS7 RNU6-187P-201ENST00000384139 106 ntBASIC-1.12□□□□□ -2.59
LINC00643Q86TS7 RNU6-480P-201ENST00000384332 107 ntBASIC-1.12□□□□□ -2.59
LINC00643Q86TS7 MIR19A-201ENST00000384878 82 ntBASIC-1.12□□□□□ -2.59
LINC00643Q86TS7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-1.12□□□□□ -2.59
LINC00643Q86TS7 AC005534.2-201ENST00000431047 433 ntBASIC-1.12□□□□□ -2.59
LINC00643Q86TS7 MTND1P31-201ENST00000449206 961 ntBASIC-1.12□□□□□ -2.59
LINC00643Q86TS7 RPS29P15-201ENST00000458329 171 ntBASIC-1.12□□□□□ -2.59
LINC00643Q86TS7 MIR4263-201ENST00000584745 83 ntBASIC-1.12□□□□□ -2.59
LINC00643Q86TS7 AL022154.1-201ENST00000604698 785 ntBASIC-1.12□□□□□ -2.59
LINC00643Q86TS7 AC107905.1-201ENST00000616204 426 ntBASIC-1.12□□□□□ -2.59
LINC00643Q86TS7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-1.12□□□□□ -2.59
LINC00643Q86TS7 RNA5SP48-201ENST00000363969 126 ntBASIC-1.13□□□□□ -2.59
LINC00643Q86TS7 Y_RNA.224-201ENST00000364308 111 ntBASIC-1.13□□□□□ -2.59
LINC00643Q86TS7 MIR549A-201ENST00000385268 96 ntBASIC-1.13□□□□□ -2.59
LINC00643Q86TS7 DEFB130D-201ENST00000426866 237 ntBASIC-1.13□□□□□ -2.59
LINC00643Q86TS7 AC007327.1-201ENST00000447461 264 ntBASIC-1.13□□□□□ -2.59
LINC00643Q86TS7 USP9YP25-201ENST00000457708 443 ntBASIC-1.13□□□□□ -2.59
LINC00643Q86TS7 HMGN1P10-201ENST00000474557 553 ntBASIC-1.13□□□□□ -2.59
LINC00643Q86TS7 AC112206.4-201ENST00000515142 405 ntBASIC-1.13□□□□□ -2.59
LINC00643Q86TS7 RNU6-180P-201ENST00000516697 61 ntBASIC-1.13□□□□□ -2.59
LINC00643Q86TS7 AC008752.3-201ENST00000588113 712 ntBASIC-1.13□□□□□ -2.59
LINC00643Q86TS7 MIR15A-201ENST00000607334 83 ntBASIC-1.13□□□□□ -2.59
LINC00643Q86TS7 MIR2909-201ENST00000617113 69 ntBASIC-1.13□□□□□ -2.59
LINC00643Q86TS7 RMST_7.1-201ENST00000621935 268 ntBASIC-1.13□□□□□ -2.59
LINC00643Q86TS7 IST1-227ENST00000626438 126 ntTSL 5 BASIC-1.13□□□□□ -2.59
LINC00643Q86TS7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-1.13□□□□□ -2.59
LINC00643Q86TS7 AC092104.1-201ENST00000497346 1441 ntBASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 RNU6-716P-201ENST00000365621 103 ntBASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 SNORA11-201ENST00000408789 128 ntBASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 MTND3P17-201ENST00000416968 344 ntBASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 RPL39P34-201ENST00000477141 156 ntBASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 AC016632.1-201ENST00000503994 196 ntBASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 RNU6-1278P-201ENST00000516130 107 ntBASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 RNU6-677P-201ENST00000516914 101 ntBASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 RN7SL793P-201ENST00000583259 296 ntBASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 AC006504.8-201ENST00000621046 635 ntBASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 MTND5P33-201ENST00000571250 1450 ntBASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-1.14□□□□□ -2.59
LINC00643Q86TS7 RNU6-527P-201ENST00000363425 104 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 RNU6-744P-201ENST00000365557 107 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 RNU6-1316P-201ENST00000384242 108 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 RNU6-975P-201ENST00000384296 105 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 RNU6-378P-201ENST00000384324 107 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 RNU4-30P-201ENST00000410245 143 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 RNU6-613P-201ENST00000410412 108 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 AC244670.1-201ENST00000436879 112 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 AL392103.1-201ENST00000447000 198 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 MTND2P6-201ENST00000455337 1030 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 AC133485.4-201ENST00000561835 220 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 AC138869.1-201ENST00000568623 124 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 AC100830.2-201ENST00000581636 240 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 MIR4432-201ENST00000581823 84 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 AC010975.3-201ENST00000618727 978 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 AL391099.1-201ENST00000624635 187 ntBASIC-1.15□□□□□ -2.59
LINC00643Q86TS7 CDR1-202ENST00000625883 1485 ntBASIC-1.16□□□□□ -2.59
LINC00643Q86TS7 MIR598-201ENST00000384868 97 ntBASIC-1.16□□□□□ -2.6
LINC00643Q86TS7 RNU4-22P-201ENST00000411058 166 ntBASIC-1.16□□□□□ -2.6
LINC00643Q86TS7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-1.16□□□□□ -2.6
LINC00643Q86TS7 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC-1.16□□□□□ -2.6
LINC00643Q86TS7 MTND2P20-201ENST00000440805 661 ntBASIC-1.16□□□□□ -2.6
LINC00643Q86TS7 AC093899.1-201ENST00000457984 376 ntBASIC-1.16□□□□□ -2.6
LINC00643Q86TS7 SNRPGP7-201ENST00000469016 106 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms