Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 Y_RNA.307-201ENST00000365022 117 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 Y_RNA.483-201ENST00000384380 101 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 MIR592-201ENST00000384959 97 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 RNU4-53P-201ENST00000410828 140 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 AC138623.1-201ENST00000418060 216 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 WARS2P1-201ENST00000429678 537 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 SNORD127-201ENST00000458892 86 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 AC021269.2-201ENST00000532318 330 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 AC079598.5-201ENST00000547460 117 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 UBL5P4-201ENST00000562584 236 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 AC136932.1-201ENST00000574771 208 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 MIR4659A-201ENST00000580269 81 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 AL034555.1-201ENST00000604816 211 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 AC103810.6-201ENST00000606708 136 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 AC005296.1-201ENST00000616145 209 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 LINC02555-201ENST00000563933 1951 ntBASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 AL109809.4-201ENST00000603520 2185 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 AC080100.1-201ENST00000624239 5356 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-212P-201ENST00000362642 104 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 RNA5SP361-201ENST00000362686 118 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-879P-201ENST00000364328 108 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-1145P-201ENST00000384246 107 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 Y_RNA.476-201ENST00000384347 108 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 MIR329-1-201ENST00000385028 80 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 MIR767-201ENST00000390228 109 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 AL079342.1-201ENST00000401460 267 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 RNA5SP201-201ENST00000410316 124 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 RPL21P38-201ENST00000418090 167 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 AC139712.2-201ENST00000424302 339 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 AC009414.1-201ENST00000427200 443 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 Z96811.1-201ENST00000445880 108 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 AC026436.1-201ENST00000510537 270 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 MIR4300-201ENST00000581016 96 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 AL356575.1-201ENST00000603008 283 ntBASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.02□□□□□ -1.93
UBE3BQ7Z3V4 BX322639.1-202ENST00000423987 2213 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-280P-201ENST00000364145 104 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 RNU4-56P-201ENST00000364700 142 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 Y_RNA.562-201ENST00000384695 113 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 MIR186-201ENST00000384988 86 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 SNORD12B-201ENST00000410433 91 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 AC104332.2-201ENST00000429959 156 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-1132P-201ENST00000459214 107 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 RNU1-41P-201ENST00000516161 162 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 RNU1-48P-201ENST00000516400 162 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 AC004486.1-201ENST00000546846 233 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 MIR3923-201ENST00000579521 83 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 MIR5695-201ENST00000579717 85 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 MIR3670-2-201ENST00000582974 65 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 MIR3670-1-201ENST00000584160 65 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 MIR3670-3-201ENST00000584855 65 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 MIR3670-4-201ENST00000612260 65 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 MIR1291-201ENST00000627649 87 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 AC138915.1-201ENST00000565427 1685 ntBASIC3.01□□□□□ -1.93
UBE3BQ7Z3V4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3□□□□□ -1.93
UBE3BQ7Z3V4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3□□□□□ -1.93
UBE3BQ7Z3V4 AC010615.1-201ENST00000594254 1764 ntBASIC3□□□□□ -1.93
UBE3BQ7Z3V4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
UBE3BQ7Z3V4 RNU5F-3P-201ENST00000363767 117 ntBASIC3□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-1318P-201ENST00000365389 103 ntBASIC3□□□□□ -1.93
UBE3BQ7Z3V4 SNORD63-201ENST00000384262 68 ntBASIC3□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-1001P-201ENST00000411265 100 ntBASIC3□□□□□ -1.93
UBE3BQ7Z3V4 AL121594.1-201ENST00000475906 575 ntBASIC3□□□□□ -1.93
UBE3BQ7Z3V4 TRBVB-201ENST00000477100 408 ntBASIC3□□□□□ -1.93
UBE3BQ7Z3V4 RPL26P26-201ENST00000480251 434 ntBASIC3□□□□□ -1.93
UBE3BQ7Z3V4 AC098869.1-201ENST00000481627 292 ntBASIC3□□□□□ -1.93
UBE3BQ7Z3V4 AC073410.2-201ENST00000603240 332 ntBASIC3□□□□□ -1.93
UBE3BQ7Z3V4 AC011476.5-201ENST00000615594 130 ntBASIC3□□□□□ -1.93
UBE3BQ7Z3V4 MIR376A1-201ENST00000616574 68 ntBASIC3□□□□□ -1.93
UBE3BQ7Z3V4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 Y_RNA.84-201ENST00000363011 104 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 snoU2_19.2-201ENST00000363024 80 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 Y_RNA.143-201ENST00000363520 106 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-1210P-201ENST00000363775 107 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-379P-201ENST00000363813 104 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-873P-201ENST00000363833 107 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 SNORA25.6-201ENST00000364121 118 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 Y_RNA.350-201ENST00000365409 98 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 Y_RNA.447-201ENST00000384184 113 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 RNU1-57P-201ENST00000384491 166 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms