Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC016542.1-201ENST00000608259 493 ntBASIC-1.13□□□□□ -2.59
VPS13CQ709C8 SNORD113.3-201ENST00000364630 78 ntBASIC-1.13□□□□□ -2.59
VPS13CQ709C8 SNORA4.2-201ENST00000365313 147 ntBASIC-1.13□□□□□ -2.59
VPS13CQ709C8 AC023512.1-201ENST00000444513 499 ntBASIC-1.13□□□□□ -2.59
VPS13CQ709C8 snoU83B.1-201ENST00000517136 88 ntBASIC-1.13□□□□□ -2.59
VPS13CQ709C8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.13□□□□□ -2.59
VPS13CQ709C8 RNU6-369P-201ENST00000362515 102 ntBASIC-1.14□□□□□ -2.59
VPS13CQ709C8 SNORA36A-201ENST00000384221 132 ntBASIC-1.14□□□□□ -2.59
VPS13CQ709C8 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-1.14□□□□□ -2.59
VPS13CQ709C8 TMSB4XP8-201ENST00000402089 135 ntBASIC-1.14□□□□□ -2.59
VPS13CQ709C8 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-1.14□□□□□ -2.59
VPS13CQ709C8 TPT1P7-201ENST00000458300 517 ntBASIC-1.14□□□□□ -2.59
VPS13CQ709C8 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.14□□□□□ -2.59
VPS13CQ709C8 AC097462.1-201ENST00000514125 324 ntBASIC-1.14□□□□□ -2.59
VPS13CQ709C8 AC010133.1-201ENST00000615809 842 ntBASIC-1.14□□□□□ -2.59
VPS13CQ709C8 MTND2P41-201ENST00000637599 773 ntBASIC-1.14□□□□□ -2.59
VPS13CQ709C8 AL357139.1-201ENST00000407792 426 ntBASIC-1.14□□□□□ -2.59
VPS13CQ709C8 RNU7-34P-201ENST00000459394 64 ntBASIC-1.14□□□□□ -2.59
VPS13CQ709C8 AC106754.2-201ENST00000623006 233 ntBASIC-1.14□□□□□ -2.59
VPS13CQ709C8 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-1.14□□□□□ -2.59
VPS13CQ709C8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.14□□□□□ -2.59
VPS13CQ709C8 AC007969.2-201ENST00000441891 191 ntBASIC-1.14□□□□□ -2.59
VPS13CQ709C8 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.14□□□□□ -2.59
VPS13CQ709C8 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.14□□□□□ -2.59
VPS13CQ709C8 AP002001.1-203ENST00000534002 267 ntBASIC-1.14□□□□□ -2.59
VPS13CQ709C8 AC090186.1-201ENST00000605991 572 ntBASIC-1.14□□□□□ -2.59
VPS13CQ709C8 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 RNU6-447P-201ENST00000410293 104 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 RNU6-355P-201ENST00000410427 104 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 RNU6-791P-201ENST00000410467 104 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 RNU6-860P-201ENST00000410860 104 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 RNU6-785P-201ENST00000411324 104 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 MTCYBP15-201ENST00000433123 1127 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 snoU13.30-201ENST00000458951 104 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 MTCYBP43-201ENST00000513621 740 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 RNU5B-3P-201ENST00000516601 115 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 AC018630.3-201ENST00000542637 96 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 AC109446.1-201ENST00000566172 220 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 AC239868.4-201ENST00000608318 671 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 AL442067.1-201ENST00000613261 223 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 U6.90-201ENST00000614007 104 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 U6.70-201ENST00000620287 104 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 AC090772.4-201ENST00000623599 362 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-1.15□□□□□ -2.59
VPS13CQ709C8 RNU6-199P-201ENST00000362954 107 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 snoU13.27-201ENST00000459278 104 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 MTCYBP40-201ENST00000509390 1135 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 CR383656.7-201ENST00000548164 174 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 AC133485.4-201ENST00000561835 220 ntBASIC-1.15□□□□□ -2.59
VPS13CQ709C8 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.15□□□□□ -2.59
VPS13CQ709C8 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.16□□□□□ -2.59
VPS13CQ709C8 RNU4-56P-201ENST00000364700 142 ntBASIC-1.16□□□□□ -2.59
VPS13CQ709C8 RNU6-741P-201ENST00000383889 107 ntBASIC-1.16□□□□□ -2.59
VPS13CQ709C8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.16□□□□□ -2.59
VPS13CQ709C8 RNU6-943P-201ENST00000516960 98 ntBASIC-1.16□□□□□ -2.59
VPS13CQ709C8 AL353803.5-201ENST00000599815 141 ntBASIC-1.16□□□□□ -2.59
VPS13CQ709C8 Z99289.3-201ENST00000605586 594 ntBASIC-1.16□□□□□ -2.59
VPS13CQ709C8 MTND4LP10-201ENST00000435146 291 ntBASIC-1.16□□□□□ -2.59
VPS13CQ709C8 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.16□□□□□ -2.59
VPS13CQ709C8 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.16□□□□□ -2.59
VPS13CQ709C8 AL158050.2-201ENST00000605336 568 ntBASIC-1.16□□□□□ -2.59
VPS13CQ709C8 RNU6-57P-201ENST00000411348 103 ntBASIC-1.16□□□□□ -2.6
VPS13CQ709C8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-1.16□□□□□ -2.6
VPS13CQ709C8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-1.16□□□□□ -2.6
VPS13CQ709C8 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-1.16□□□□□ -2.6
VPS13CQ709C8 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-1.16□□□□□ -2.6
VPS13CQ709C8 RNA5SP272-201ENST00000516095 111 ntBASIC-1.16□□□□□ -2.6
VPS13CQ709C8 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC-1.16□□□□□ -2.6
VPS13CQ709C8 AC006213.4-201ENST00000616184 634 ntBASIC-1.16□□□□□ -2.6
VPS13CQ709C8 MIR6502-201ENST00000617296 76 ntBASIC-1.16□□□□□ -2.6
VPS13CQ709C8 AC244250.2-201ENST00000418731 148 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 AC006366.1-201ENST00000422002 759 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 MTCO3P29-201ENST00000432119 779 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.17□□□□□ -2.6
VPS13CQ709C8 AC091135.1-201ENST00000585943 307 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 AC078795.3-201ENST00000602913 472 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 AC105081.1-201ENST00000617727 106 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 SNORD38B-202ENST00000625943 69 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.17□□□□□ -2.6
VPS13CQ709C8 MTND1P31-201ENST00000449206 961 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 AC100767.1-201ENST00000528178 123 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-1.17□□□□□ -2.6
VPS13CQ709C8 MIR3179-1-201ENST00000578940 84 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 MIR3179-2-201ENST00000579107 84 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 MIR3179-3-201ENST00000579566 84 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
VPS13CQ709C8 MIR3179-4-201ENST00000617599 84 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.17□□□□□ -2.6
VPS13CQ709C8 AL596211.1-201ENST00000569873 2277 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 AL355994.1-201ENST00000424379 260 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 USP9YP16-201ENST00000430287 407 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 MTCO3P27-201ENST00000514397 196 ntBASIC-1.17□□□□□ -2.6
VPS13CQ709C8 SNORA18.7-201ENST00000516910 131 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms