Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 AC010615.1-201ENST00000594254 1764 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 SNORD113-8-201ENST00000363497 74 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 SNORA38-201ENST00000363946 132 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 Y_RNA.188-201ENST00000363952 111 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 RNU6-944P-201ENST00000364023 107 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 Y_RNA.307-201ENST00000365022 117 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 Y_RNA.415-201ENST00000384012 112 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 SNORD63-201ENST00000384262 68 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 RNU2-38P-201ENST00000410856 79 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 AC007064.1-201ENST00000412238 351 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 AC096920.1-201ENST00000423991 241 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 AC009237.7-201ENST00000447357 229 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 SNORD127-201ENST00000458892 86 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 RNU6-625P-201ENST00000459412 107 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 AC023141.11-201ENST00000508864 202 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 MIR449C-201ENST00000516047 92 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 RNU6-1271P-201ENST00000517049 105 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 RNU6-586P-201ENST00000517265 104 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 AC018448.1-201ENST00000552843 316 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 AC233702.2-202ENST00000562547 291 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 MIR3605-201ENST00000583214 100 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 MIR6075-201ENST00000620782 95 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 FO624990.1-201ENST00000636373 85 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.59□□□□□ -1.99
PTCHD4Q6ZW05 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
PTCHD4Q6ZW05 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -2
PTCHD4Q6ZW05 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.59□□□□□ -2
PTCHD4Q6ZW05 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PTCHD4Q6ZW05 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.58□□□□□ -2
PTCHD4Q6ZW05 RNA5SP374-201ENST00000362939 125 ntBASIC2.58□□□□□ -2
PTCHD4Q6ZW05 SNORA67.1-201ENST00000364749 141 ntBASIC2.58□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.462-201ENST00000384268 102 ntBASIC2.58□□□□□ -2
PTCHD4Q6ZW05 RNU6-102P-201ENST00000384485 104 ntBASIC2.58□□□□□ -2
PTCHD4Q6ZW05 RNU6-1203P-201ENST00000410703 110 ntBASIC2.58□□□□□ -2
PTCHD4Q6ZW05 ELOCP21-201ENST00000412558 336 ntBASIC2.58□□□□□ -2
PTCHD4Q6ZW05 RNU6-1132P-201ENST00000459214 107 ntBASIC2.58□□□□□ -2
PTCHD4Q6ZW05 AC074133.1-201ENST00000515696 183 ntBASIC2.58□□□□□ -2
PTCHD4Q6ZW05 RNU6-344P-201ENST00000516635 111 ntBASIC2.58□□□□□ -2
PTCHD4Q6ZW05 RNU1-117P-201ENST00000517041 158 ntBASIC2.58□□□□□ -2
PTCHD4Q6ZW05 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.58□□□□□ -2
PTCHD4Q6ZW05 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.58□□□□□ -2
PTCHD4Q6ZW05 MIR4446-201ENST00000578505 67 ntBASIC2.58□□□□□ -2
PTCHD4Q6ZW05 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.58□□□□□ -2
PTCHD4Q6ZW05 SNORD11B-201ENST00000607707 90 ntBASIC2.58□□□□□ -2
PTCHD4Q6ZW05 AC084757.4-201ENST00000616350 526 ntBASIC2.58□□□□□ -2
PTCHD4Q6ZW05 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.58□□□□□ -2
PTCHD4Q6ZW05 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.58□□□□□ -2
PTCHD4Q6ZW05 AC092593.1-201ENST00000515413 1815 ntBASIC2.58□□□□□ -2
PTCHD4Q6ZW05 SNORD87-201ENST00000364849 89 ntBASIC2.57□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.498-201ENST00000384460 102 ntBASIC2.57□□□□□ -2
PTCHD4Q6ZW05 MT-TG-201ENST00000387429 68 ntBASIC2.57□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.581-201ENST00000391017 97 ntBASIC2.57□□□□□ -2
PTCHD4Q6ZW05 RNU4-30P-201ENST00000410245 143 ntBASIC2.57□□□□□ -2
PTCHD4Q6ZW05 RNU5A-5P-201ENST00000411054 116 ntBASIC2.57□□□□□ -2
PTCHD4Q6ZW05 BX510359.1-201ENST00000456973 237 ntBASIC2.57□□□□□ -2
PTCHD4Q6ZW05 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.57□□□□□ -2
PTCHD4Q6ZW05 RNU6-496P-201ENST00000516145 99 ntBASIC2.57□□□□□ -2
PTCHD4Q6ZW05 AK6P2-201ENST00000549020 471 ntBASIC2.57□□□□□ -2
PTCHD4Q6ZW05 MIR4423-201ENST00000580922 80 ntBASIC2.57□□□□□ -2
PTCHD4Q6ZW05 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.57□□□□□ -2
PTCHD4Q6ZW05 AC005176.2-201ENST00000596933 147 ntBASIC2.57□□□□□ -2
PTCHD4Q6ZW05 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.57□□□□□ -2
PTCHD4Q6ZW05 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.57□□□□□ -2
PTCHD4Q6ZW05 AP001282.2-201ENST00000616149 309 ntBASIC2.57□□□□□ -2
PTCHD4Q6ZW05 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.57□□□□□ -2
PTCHD4Q6ZW05 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.57□□□□□ -2
PTCHD4Q6ZW05 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.57□□□□□ -2
PTCHD4Q6ZW05 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.57□□□□□ -2
PTCHD4Q6ZW05 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.57□□□□□ -2
PTCHD4Q6ZW05 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.57□□□□□ -2
PTCHD4Q6ZW05 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.57□□□□□ -2
PTCHD4Q6ZW05 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
PTCHD4Q6ZW05 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PTCHD4Q6ZW05 MIR26A1-201ENST00000362205 77 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.16-201ENST00000362421 102 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 SNORA38.1-201ENST00000364172 131 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.541-201ENST00000384640 113 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 Y_RNA.570-201ENST00000384750 101 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 MIR34B-201ENST00000385076 84 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 MIR1294-201ENST00000408503 142 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.56□□□□□ -2
PTCHD4Q6ZW05 RAB28P5-201ENST00000427490 651 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 AC080013.2-201ENST00000460866 323 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 AC003982.1-202ENST00000469928 248 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 AC083906.5-201ENST00000503722 328 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 AC107222.1-201ENST00000510899 637 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 RNU6-1098P-201ENST00000516772 96 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 RNU7-110P-201ENST00000516891 62 ntBASIC2.56□□□□□ -2
PTCHD4Q6ZW05 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms