Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 AC009487.4-201ENST00000624969 3585 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 RNU6-874P-201ENST00000362390 105 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 Y_RNA.61-201ENST00000362835 102 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 Y_RNA.132-201ENST00000363421 102 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 SNORA5B-201ENST00000363786 132 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 RNU6-793P-201ENST00000384233 104 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 MIR518A2-201ENST00000384966 87 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 SNORD23.1-201ENST00000408212 104 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 AC009963.1-201ENST00000417265 157 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 MIR2053-201ENST00000459295 91 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 RN7SL636P-201ENST00000497504 294 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 RNU2-34P-201ENST00000516534 121 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 CYCSP23-201ENST00000519781 313 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 AC144568.1-201ENST00000520139 137 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 UBL5P4-201ENST00000562584 236 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 MIR4529-201ENST00000578110 78 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 SNORD53-201ENST00000579969 78 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 MIR5002-201ENST00000584713 97 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 MIR4753-201ENST00000585119 83 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 AC005296.1-201ENST00000616145 209 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 AC008873.1-201ENST00000625051 138 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 CTSLP2-204ENST00000629029 392 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 MIR203B-201ENST00000636080 86 ntBASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LRIF1Q5T3J3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 LINC02555-201ENST00000563933 1951 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 RNU6-545P-201ENST00000362681 104 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 RNU6-797P-201ENST00000363101 109 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 Y_RNA.179-201ENST00000363844 90 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 RNA5SP37-201ENST00000365420 130 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 SNORA67.2-201ENST00000384300 149 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 SNORA48.3-201ENST00000391081 134 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 AC074290.1-201ENST00000448883 135 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 RNU7-87P-201ENST00000459343 62 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 RNU6-120P-201ENST00000516077 103 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 MIR5695-201ENST00000579717 85 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 AC010999.1-201ENST00000611856 324 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 MIR1244-1-201ENST00000612829 85 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 AC012640.5-201ENST00000623897 319 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 MIR1244-3-201ENST00000635744 85 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 AC068205.3-201ENST00000636385 468 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 MIR1244-2-201ENST00000636449 85 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 MIR1244-4-202ENST00000636813 85 ntBASIC2.09□□□□□ -2.07
LRIF1Q5T3J3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 RNU1-58P-201ENST00000362413 163 ntBASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 RNU6-222P-201ENST00000362438 107 ntBASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 Y_RNA.463-201ENST00000384271 102 ntBASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 Y_RNA.557-201ENST00000384680 107 ntBASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 SNORA69.1-201ENST00000390904 137 ntBASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 RNA5SP465-201ENST00000391195 109 ntBASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 MTND4P28-201ENST00000426217 387 ntBASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 MTCO1P44-201ENST00000441935 243 ntBASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 AL357134.1-201ENST00000445848 426 ntBASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 NDUFB4P10-201ENST00000452541 359 ntBASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 AC067942.3-201ENST00000512025 362 ntBASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 RNU6-1170P-201ENST00000515974 106 ntBASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 RNU6-976P-201ENST00000516086 111 ntBASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 RNA5SP200-201ENST00000516360 103 ntBASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 AC130454.1-201ENST00000622948 401 ntBASIC2.08□□□□□ -2.08
LRIF1Q5T3J3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 Y_RNA.358-201ENST00000365491 99 ntBASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 SNORA67.4-201ENST00000384688 142 ntBASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 U3.40-201ENST00000408706 208 ntBASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 AC114482.1-201ENST00000418010 247 ntBASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 HMGN2P9-201ENST00000476875 229 ntBASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 AC090255.1-201ENST00000495779 349 ntBASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 RNU6-948P-201ENST00000516374 107 ntBASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 Y_RNA.683-201ENST00000516508 93 ntBASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 RNU6-699P-201ENST00000517081 110 ntBASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 RNU2-19P-201ENST00000517288 84 ntBASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 AC093023.1-201ENST00000547375 507 ntBASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms