Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 RNU6-545P-201ENST00000362681 104 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-727P-201ENST00000363592 107 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 SNORA5B-201ENST00000363786 132 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 SNORA80A-201ENST00000363922 136 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 SNORD31B-201ENST00000364977 69 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-793P-201ENST00000384233 104 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 SNORA67.2-201ENST00000384300 149 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-1011P-201ENST00000384668 107 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 MIR628-201ENST00000385229 95 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 AL160004.2-201ENST00000432935 350 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 AC010095.1-201ENST00000443543 144 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 IFNA11P-201ENST00000446352 526 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 AC112492.4-201ENST00000456549 352 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 HMGB3P3-201ENST00000510526 400 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 RN7SKP132-201ENST00000516001 208 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 AL442163.3-201ENST00000554110 156 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 GTF3AP2-201ENST00000557014 266 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 SNORD14A-201ENST00000606526 91 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 AC083806.3-201ENST00000614016 455 ntBASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
RUNDC3AQ59EK9 RNU5F-3P-201ENST00000363767 117 ntBASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 Y_RNA.179-201ENST00000363844 90 ntBASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 Y_RNA.415-201ENST00000384012 112 ntBASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-1145P-201ENST00000384246 107 ntBASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 MIR1262-201ENST00000408276 93 ntBASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 AC016925.1-201ENST00000458303 298 ntBASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 AC096725.1-201ENST00000514266 313 ntBASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 Y_RNA.683-201ENST00000516508 93 ntBASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 RNU1-117P-201ENST00000517041 158 ntBASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-988P-201ENST00000519081 107 ntBASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 RRN3P3-201ENST00000549207 578 ntBASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 SNORD11B-201ENST00000607707 90 ntBASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 AL357075.2-201ENST00000614906 189 ntBASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 AC008873.1-201ENST00000625051 138 ntBASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RUNDC3AQ59EK9 MTND5P35-201ENST00000557537 1720 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 RNU1-91P-201ENST00000364746 163 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 Y_RNA.332-201ENST00000365271 113 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 RNU1-52P-201ENST00000384190 164 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 RNY3P4-201ENST00000384428 101 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-1026P-201ENST00000384465 108 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 AL033519.2-201ENST00000403958 392 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 SRIP3-201ENST00000413200 219 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 AC007395.1-201ENST00000451333 677 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 AL137159.1-201ENST00000452808 512 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 HMGN2P9-201ENST00000476875 229 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 SNORA25.10-201ENST00000515926 124 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 RNU6-475P-201ENST00000516073 104 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 SNORA40.14-201ENST00000516543 86 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 RN7SKP49-201ENST00000516675 260 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 AC091144.1-201ENST00000519573 138 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 AP003072.1-201ENST00000531740 145 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 GNAI2P1-201ENST00000541815 315 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 AK6P2-201ENST00000549020 471 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 MIR4719-201ENST00000585233 84 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 AC025754.2-201ENST00000606491 432 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 AL138825.1-201ENST00000618587 192 ntBASIC2.34□□□□□ -2.03
RUNDC3AQ59EK9 AC091812.1-201ENST00000432235 1948 ntBASIC2.34□□□□□ -2.04
RUNDC3AQ59EK9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 AC005592.1-201ENST00000566527 1640 ntBASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 SNORD87-201ENST00000364849 89 ntBASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 Y_RNA.645-201ENST00000391229 102 ntBASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 MIR1283-1-201ENST00000408494 87 ntBASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 EDDM3CP-201ENST00000415977 425 ntBASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 AC107083.1-201ENST00000439643 279 ntBASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 AC068205.3-201ENST00000636385 468 ntBASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 MTND4P1-201ENST00000457501 1466 ntBASIC2.33□□□□□ -2.04
RUNDC3AQ59EK9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 MIR340-201ENST00000362125 95 ntBASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 XGY1-201ENST00000381172 446 ntBASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 MIR586-201ENST00000385035 97 ntBASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 MIR300-201ENST00000401138 83 ntBASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 SNORD12B-201ENST00000410433 91 ntBASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 RNU2-52P-201ENST00000410680 190 ntBASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 AC105272.1-201ENST00000438604 198 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms