Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AF228730.4-201ENST00000421457 183 ntBASIC2.28□□□□□ -2.04
USP41Q3LFD5 AL035666.1-201ENST00000446195 348 ntBASIC2.28□□□□□ -2.04
USP41Q3LFD5 IFNA11P-201ENST00000446352 526 ntBASIC2.28□□□□□ -2.04
USP41Q3LFD5 AC108210.2-201ENST00000503681 201 ntBASIC2.28□□□□□ -2.04
USP41Q3LFD5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.28□□□□□ -2.04
USP41Q3LFD5 RNU5F-4P-201ENST00000516581 114 ntBASIC2.28□□□□□ -2.04
USP41Q3LFD5 RNU6-58P-201ENST00000517143 103 ntBASIC2.28□□□□□ -2.04
USP41Q3LFD5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.28□□□□□ -2.04
USP41Q3LFD5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.28□□□□□ -2.04
USP41Q3LFD5 AC090574.1-201ENST00000623186 233 ntBASIC2.28□□□□□ -2.04
USP41Q3LFD5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
USP41Q3LFD5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
USP41Q3LFD5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
USP41Q3LFD5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
USP41Q3LFD5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
USP41Q3LFD5 AC006026.1-201ENST00000444025 1803 ntBASIC2.27□□□□□ -2.05
USP41Q3LFD5 RNU6-1040P-201ENST00000383974 107 ntBASIC2.27□□□□□ -2.05
USP41Q3LFD5 MIR764-201ENST00000390811 85 ntBASIC2.27□□□□□ -2.05
USP41Q3LFD5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USP41Q3LFD5 AL445646.1-201ENST00000431784 216 ntBASIC2.27□□□□□ -2.05
USP41Q3LFD5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.27□□□□□ -2.05
USP41Q3LFD5 AL139109.1-201ENST00000455491 297 ntBASIC2.27□□□□□ -2.05
USP41Q3LFD5 RNU7-152P-201ENST00000458982 64 ntBASIC2.27□□□□□ -2.05
USP41Q3LFD5 AP000870.1-201ENST00000472927 406 ntBASIC2.27□□□□□ -2.05
USP41Q3LFD5 AC027575.1-201ENST00000481064 460 ntBASIC2.27□□□□□ -2.05
USP41Q3LFD5 AC132942.1-201ENST00000486753 483 ntBASIC2.27□□□□□ -2.05
USP41Q3LFD5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.27□□□□□ -2.05
USP41Q3LFD5 RNU6-1098P-201ENST00000516772 96 ntBASIC2.27□□□□□ -2.05
USP41Q3LFD5 RNU6-1198P-201ENST00000516904 67 ntBASIC2.27□□□□□ -2.05
USP41Q3LFD5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.27□□□□□ -2.05
USP41Q3LFD5 AC027288.2-201ENST00000553028 243 ntBASIC2.27□□□□□ -2.05
USP41Q3LFD5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.27□□□□□ -2.05
USP41Q3LFD5 AL050343.2-201ENST00000607338 280 ntBASIC2.27□□□□□ -2.05
USP41Q3LFD5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.27□□□□□ -2.05
USP41Q3LFD5 AC005562.2-201ENST00000618264 111 ntBASIC2.27□□□□□ -2.05
USP41Q3LFD5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USP41Q3LFD5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USP41Q3LFD5 RNU6-222P-201ENST00000362438 107 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 RNU6-234P-201ENST00000365229 104 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 RNA5SP37-201ENST00000365420 130 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 Y_RNA.431-201ENST00000384086 102 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 Y_RNA.535-201ENST00000384612 99 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 MIR559-201ENST00000385188 96 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 MIR320B2-201ENST00000408479 138 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 RNU6-1156P-201ENST00000410365 100 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 RNU2-48P-201ENST00000410694 191 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 AC004386.2-201ENST00000441858 148 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 AC007215.1-201ENST00000464893 276 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 RPL23AP42-201ENST00000471152 471 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 AC105758.1-201ENST00000506038 399 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.26□□□□□ -2.05
USP41Q3LFD5 RNU2-44P-201ENST00000516795 194 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 RNA5SP54-201ENST00000516951 92 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 AC034114.1-201ENST00000520293 285 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 DEFB131C-201ENST00000528817 165 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 CYCSP26-201ENST00000534107 320 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 ANP32BP3-201ENST00000559213 706 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.26□□□□□ -2.05
USP41Q3LFD5 AC026470.2-201ENST00000561492 181 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 UBL5P4-201ENST00000562584 236 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 SUB1P3-201ENST00000564581 315 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 MIR3126-201ENST00000577443 74 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 MIR5006-201ENST00000583027 110 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 SNRPGP20-201ENST00000604477 205 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 AC025754.2-201ENST00000606491 432 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 AL132822.1-201ENST00000617063 513 ntBASIC2.26□□□□□ -2.05
USP41Q3LFD5 RNU6-874P-201ENST00000362390 105 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 RNU6-490P-201ENST00000362985 107 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 Y_RNA.315-201ENST00000365117 102 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 Y_RNA.460-201ENST00000384255 102 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 RNU6-611P-201ENST00000384276 104 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 RNU1-148P-201ENST00000384472 162 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 Y_RNA.577-201ENST00000384794 101 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 USP9YP16-201ENST00000430287 407 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 MTCO3P8-201ENST00000453691 755 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.25□□□□□ -2.05
USP41Q3LFD5 USP9YP23-201ENST00000455085 407 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 RNU7-14P-201ENST00000459331 62 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 RPS23P5-201ENST00000495419 428 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 RNU6-1170P-201ENST00000515974 106 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 RNU6-991P-201ENST00000516168 107 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 RNU6-699P-201ENST00000517081 110 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 SNORD14A-201ENST00000606526 91 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 AC022202.1-201ENST00000613515 211 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 AC245884.12-201ENST00000615364 59 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
USP41Q3LFD5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
USP41Q3LFD5 MTND5P16-201ENST00000460269 1703 ntBASIC2.25□□□□□ -2.05
USP41Q3LFD5 BX322639.1-202ENST00000423987 2213 ntBASIC2.24□□□□□ -2.05
USP41Q3LFD5 SNORD115-8-201ENST00000363856 82 ntBASIC2.24□□□□□ -2.05
USP41Q3LFD5 SNORD115-38-201ENST00000365037 82 ntBASIC2.24□□□□□ -2.05
USP41Q3LFD5 Y_RNA.314-201ENST00000365114 102 ntBASIC2.24□□□□□ -2.05
USP41Q3LFD5 MRPS18CP6-201ENST00000423587 223 ntBASIC2.24□□□□□ -2.05
USP41Q3LFD5 HMGN2P18-201ENST00000450680 270 ntBASIC2.24□□□□□ -2.05
USP41Q3LFD5 HMGN1P13-201ENST00000505795 138 ntBASIC2.24□□□□□ -2.05
USP41Q3LFD5 Y_RNA.661-201ENST00000516003 99 ntBASIC2.24□□□□□ -2.05
USP41Q3LFD5 SNORA25.14-201ENST00000516481 132 ntBASIC2.24□□□□□ -2.05
USP41Q3LFD5 RNA5SP490-201ENST00000517141 136 ntBASIC2.24□□□□□ -2.05
USP41Q3LFD5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms