Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL137067.1-201ENST00000615933 120 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 AC018692.3-201ENST00000623929 123 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 MIR6715B-201ENST00000637172 77 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 AC093908.1-201ENST00000623125 8092 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 AL136964.1-201ENST00000622038 2990 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 RNU6-778P-201ENST00000363269 103 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 Y_RNA.124-201ENST00000363339 93 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 RNU6-497P-201ENST00000365316 104 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 SNORD116-13-201ENST00000384408 92 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 RNA5SP390-201ENST00000410191 113 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 AC099548.1-201ENST00000421443 426 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 AC012308.1-201ENST00000451232 178 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 RNU6-1337P-201ENST00000516525 95 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 RNU6-113P-201ENST00000516653 101 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 AC027176.1-201ENST00000560204 514 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 AC090897.2-201ENST00000581715 130 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 AC105245.1-201ENST00000581934 244 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 RNU1-30P-201ENST00000606575 163 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 IGLL4P-201ENST00000614590 133 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 MIR7112-201ENST00000616126 65 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 AC005562.2-201ENST00000618264 111 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 MIR7154-201ENST00000620673 73 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RSPO4Q2I0M5 AL356489.2-201ENST00000566968 3528 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 RNU1-75P-201ENST00000347264 129 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 RNY4P6-201ENST00000363667 96 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 U3.8-201ENST00000363675 217 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 RNA5SP235-201ENST00000365411 114 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 MIR513A2-201ENST00000385249 127 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 EI24P2-201ENST00000397776 1076 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 AC007064.1-201ENST00000412238 351 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 RPL23AP82-202ENST00000427528 469 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 AC027124.2-201ENST00000428249 105 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 RPL23AP7-203ENST00000449021 469 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 CENPBD1P1-201ENST00000464061 469 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 AC091826.1-201ENST00000514065 313 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 RNU6-857P-201ENST00000515893 110 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 SNORD77.4-201ENST00000516158 81 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 MIR3945-201ENST00000581853 98 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 MIR5006-201ENST00000583027 110 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 AL365205.2-201ENST00000594586 68 ntBASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RSPO4Q2I0M5 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 RNA5SP374-201ENST00000362939 125 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 Y_RNA.366-201ENST00000365540 102 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 RNU1-73P-201ENST00000383971 164 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 RNU6-622P-201ENST00000384272 103 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 RNA5SP146-201ENST00000410743 123 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 AC092047.1-201ENST00000424997 240 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 S100A11P2-201ENST00000467589 312 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 SRIP1-201ENST00000489235 288 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 RPL36AP21-201ENST00000490372 323 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 PPBPP1-201ENST00000510807 373 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 RNU2-13P-201ENST00000515909 113 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 AC019288.1-201ENST00000557918 224 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 AC006023.1-201ENST00000603944 259 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 AC005972.2-201ENST00000604690 348 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 AL672296.1-201ENST00000427780 2158 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 MFSD8-236ENST00000641509 4050 ntBASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC3.66□□□□□ -1.82
RSPO4Q2I0M5 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms