Protein–RNA interactions for Protein: Q15477

SKIV2L, Helicase SKI2W, humanhuman

Known RBP Predictions only

Length 1,246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2LQ15477 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.34□□□□□ -1.72
SKIV2LQ15477 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
SKIV2LQ15477 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SKIV2LQ15477 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.33□□□□□ -1.72
SKIV2LQ15477 ZNF702P-202ENST00000434269 1966 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 SNORD116-14-201ENST00000383894 92 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 SNORD116-17-201ENST00000383929 92 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 Y_RNA.393-201ENST00000383936 102 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 SNORD116-15-201ENST00000384445 92 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 SNORD116-19-201ENST00000384729 92 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 RNA5SP496-201ENST00000391240 109 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 RNU4-43P-201ENST00000410628 137 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 AC004552.1-201ENST00000419089 348 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 AC008134.1-201ENST00000420943 193 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 AL353705.1-201ENST00000433468 480 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.33□□□□□ -1.72
SKIV2LQ15477 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.33□□□□□ -1.72
SKIV2LQ15477 RPS26P3-201ENST00000470205 348 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 AC090543.2-201ENST00000483963 348 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 AC004057.1-201ENST00000485827 348 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 RPL23AP94-201ENST00000512518 302 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SKIV2LQ15477 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.33□□□□□ -1.72
SKIV2LQ15477 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SKIV2LQ15477 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 AC006435.5-201ENST00000624486 112 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SKIV2LQ15477 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SKIV2LQ15477 Z82209.1-201ENST00000422141 2135 ntBASIC4.33□□□□□ -1.72
SKIV2LQ15477 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SKIV2LQ15477 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SKIV2LQ15477 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.32□□□□□ -1.72
SKIV2LQ15477 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SKIV2LQ15477 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SKIV2LQ15477 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SKIV2LQ15477 Y_RNA.218-201ENST00000364218 104 ntBASIC4.32□□□□□ -1.72
SKIV2LQ15477 RNU4-41P-201ENST00000364426 143 ntBASIC4.32□□□□□ -1.72
SKIV2LQ15477 Y_RNA.273-201ENST00000364703 102 ntBASIC4.32□□□□□ -1.72
SKIV2LQ15477 RNU6-418P-201ENST00000384035 107 ntBASIC4.32□□□□□ -1.72
SKIV2LQ15477 U8.11-201ENST00000384699 133 ntBASIC4.32□□□□□ -1.72
SKIV2LQ15477 AC017083.1-201ENST00000428093 483 ntBASIC4.32□□□□□ -1.72
SKIV2LQ15477 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.32□□□□□ -1.72
SKIV2LQ15477 BX510359.1-201ENST00000456973 237 ntBASIC4.32□□□□□ -1.72
SKIV2LQ15477 U8.18-201ENST00000459285 133 ntBASIC4.32□□□□□ -1.72
SKIV2LQ15477 AC008155.2-201ENST00000464337 397 ntBASIC4.32□□□□□ -1.72
SKIV2LQ15477 AC104619.4-201ENST00000510773 249 ntBASIC4.32□□□□□ -1.72
SKIV2LQ15477 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.32□□□□□ -1.72
SKIV2LQ15477 AL031274.2-201ENST00000599419 203 ntBASIC4.32□□□□□ -1.72
SKIV2LQ15477 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.32□□□□□ -1.72
SKIV2LQ15477 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.32□□□□□ -1.72
SKIV2LQ15477 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.31□□□□□ -1.72
SKIV2LQ15477 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SKIV2LQ15477 SNORA60-201ENST00000362396 134 ntBASIC4.31□□□□□ -1.72
SKIV2LQ15477 RNU6-1180P-201ENST00000364935 107 ntBASIC4.31□□□□□ -1.72
SKIV2LQ15477 RNU6-1235P-201ENST00000384559 107 ntBASIC4.31□□□□□ -1.72
SKIV2LQ15477 Y_RNA.587-201ENST00000391210 103 ntBASIC4.31□□□□□ -1.72
SKIV2LQ15477 AL035423.1-201ENST00000420331 213 ntBASIC4.31□□□□□ -1.72
SKIV2LQ15477 RPS12P18-201ENST00000442381 270 ntBASIC4.31□□□□□ -1.72
SKIV2LQ15477 RNU6-498P-201ENST00000459468 107 ntBASIC4.31□□□□□ -1.72
SKIV2LQ15477 RNU6-63P-201ENST00000516690 95 ntBASIC4.31□□□□□ -1.72
SKIV2LQ15477 RNU6-1234P-201ENST00000516877 103 ntBASIC4.31□□□□□ -1.72
SKIV2LQ15477 AC025647.1-201ENST00000517879 253 ntBASIC4.31□□□□□ -1.72
SKIV2LQ15477 AC018630.3-201ENST00000542637 96 ntBASIC4.31□□□□□ -1.72
SKIV2LQ15477 AC023043.3-201ENST00000593113 385 ntBASIC4.31□□□□□ -1.72
SKIV2LQ15477 MIR6868-201ENST00000611215 58 ntBASIC4.31□□□□□ -1.72
SKIV2LQ15477 MIR7975-201ENST00000619350 68 ntBASIC4.31□□□□□ -1.72
SKIV2LQ15477 AC012640.5-201ENST00000623897 319 ntBASIC4.31□□□□□ -1.72
SKIV2LQ15477 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.31□□□□□ -1.72
SKIV2LQ15477 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.31□□□□□ -1.72
SKIV2LQ15477 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
SKIV2LQ15477 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.31□□□□□ -1.72
SKIV2LQ15477 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SKIV2LQ15477 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SKIV2LQ15477 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SKIV2LQ15477 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SKIV2LQ15477 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SKIV2LQ15477 SNORD74.4-201ENST00000364129 80 ntBASIC4.3□□□□□ -1.72
SKIV2LQ15477 RNA5SP97-201ENST00000365006 84 ntBASIC4.3□□□□□ -1.72
SKIV2LQ15477 RNU6-1240P-201ENST00000365155 104 ntBASIC4.3□□□□□ -1.72
SKIV2LQ15477 RNU6-1080P-201ENST00000383982 107 ntBASIC4.3□□□□□ -1.72
SKIV2LQ15477 RNU1-101P-201ENST00000391171 127 ntBASIC4.3□□□□□ -1.72
SKIV2LQ15477 RNU6-588P-201ENST00000410281 105 ntBASIC4.3□□□□□ -1.72
SKIV2LQ15477 RN7SKP167-201ENST00000411047 285 ntBASIC4.3□□□□□ -1.72
SKIV2LQ15477 TBCAP1-201ENST00000436520 327 ntBASIC4.3□□□□□ -1.72
SKIV2LQ15477 AC016925.1-201ENST00000458303 298 ntBASIC4.3□□□□□ -1.72
SKIV2LQ15477 RNU7-197P-201ENST00000458836 62 ntBASIC4.3□□□□□ -1.72
SKIV2LQ15477 AC080013.2-201ENST00000460866 323 ntBASIC4.3□□□□□ -1.72
SKIV2LQ15477 AC092991.1-201ENST00000477176 376 ntBASIC4.3□□□□□ -1.72
SKIV2LQ15477 AC103988.1-201ENST00000566382 2177 ntBASIC4.3□□□□□ -1.72
SKIV2LQ15477 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.3□□□□□ -1.72
SKIV2LQ15477 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SKIV2LQ15477 RNU6-674P-201ENST00000363831 107 ntBASIC4.29□□□□□ -1.72
SKIV2LQ15477 SNORD45.3-201ENST00000363836 72 ntBASIC4.29□□□□□ -1.72
SKIV2LQ15477 Y_RNA.353-201ENST00000365440 108 ntBASIC4.29□□□□□ -1.72
SKIV2LQ15477 RNU6-80P-201ENST00000384195 107 ntBASIC4.29□□□□□ -1.72
SKIV2LQ15477 SNORD20-201ENST00000384550 80 ntBASIC4.29□□□□□ -1.72
SKIV2LQ15477 MIR218-1-201ENST00000384999 110 ntBASIC4.29□□□□□ -1.72
SKIV2LQ15477 SNORA48.2-201ENST00000390926 124 ntBASIC4.29□□□□□ -1.72
SKIV2LQ15477 SNORA75.5-201ENST00000391291 81 ntBASIC4.29□□□□□ -1.72
SKIV2LQ15477 AL139247.1-201ENST00000422768 325 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms