Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC023790.1-201ENST00000482174 347 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 RPL23AP63-201ENST00000498752 471 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 AC011406.1-201ENST00000512440 370 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 RNU6-948P-201ENST00000516374 107 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 MIR4285-201ENST00000581001 85 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 AC068205.3-201ENST00000636385 468 ntBASIC1.4□□□□□ -2.19
RAB40BQ12829 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RAB40BQ12829 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.4□□□□□ -2.19
RAB40BQ12829 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
RAB40BQ12829 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
RAB40BQ12829 AC010615.1-201ENST00000594254 1764 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 MIR126-201ENST00000362291 85 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 Y_RNA.135-201ENST00000363439 95 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 RNY4P14-201ENST00000363656 96 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 Y_RNA.212-201ENST00000364177 102 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 RNU6-338P-201ENST00000383888 105 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 U8.10-201ENST00000384260 133 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 RNU6-975P-201ENST00000384296 105 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 RNU6-1235P-201ENST00000384559 107 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 AL589823.1-201ENST00000429577 183 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 AC245047.4-201ENST00000433189 144 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 UBE2V1P8-201ENST00000437166 265 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.39□□□□□ -2.19
RAB40BQ12829 RNU6-498P-201ENST00000459468 107 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 RPL36AP21-201ENST00000490372 323 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.39□□□□□ -2.19
RAB40BQ12829 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.39□□□□□ -2.19
RAB40BQ12829 ACA59.1-201ENST00000515966 143 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 RNU6-720P-201ENST00000516363 108 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 RNA5SP384-201ENST00000516615 116 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 RNU6-250P-201ENST00000516958 103 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 TPRKBP2-201ENST00000565969 475 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 EIF1P4-201ENST00000572664 335 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 MIR3672-201ENST00000584290 82 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 MIR502-201ENST00000606349 86 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.39□□□□□ -2.19
RAB40BQ12829 AC093783.1-201ENST00000612976 329 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 MIR6845-201ENST00000613182 61 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 AC090617.10-201ENST00000624308 134 ntBASIC1.39□□□□□ -2.19
RAB40BQ12829 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RAB40BQ12829 Y_RNA.3-201ENST00000362331 103 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 RNU6-1019P-201ENST00000364424 107 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 RNU4-9P-201ENST00000364951 139 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 RNU4-12P-201ENST00000365233 139 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 MIR586-201ENST00000385035 97 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 AL117342.1-201ENST00000404861 406 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 MIR1267-201ENST00000408723 78 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.38□□□□□ -2.19
RAB40BQ12829 HSPE1P9-201ENST00000440046 311 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.38□□□□□ -2.19
RAB40BQ12829 snoU13.23-201ENST00000458863 104 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 RNU6-548P-201ENST00000517083 115 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 RNA5SP437-201ENST00000517249 129 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 AC084364.2-201ENST00000546924 395 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.38□□□□□ -2.19
RAB40BQ12829 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.38□□□□□ -2.19
RAB40BQ12829 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.38□□□□□ -2.19
RAB40BQ12829 AC019193.3-201ENST00000609144 554 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 AL353149.1-201ENST00000610667 244 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 AC126177.8-201ENST00000618339 1015 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 AC009033.1-201ENST00000624279 431 ntBASIC1.38□□□□□ -2.19
RAB40BQ12829 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.38□□□□□ -2.19
RAB40BQ12829 RNU1-42P-201ENST00000364033 160 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 Y_RNA.450-201ENST00000384198 113 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 Y_RNA.573-201ENST00000384763 105 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 MIR32-201ENST00000384965 70 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 AC009161.1-201ENST00000417306 376 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 AL513185.2-201ENST00000425543 193 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 CST2P1-201ENST00000425770 87 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 C8orf59P1-201ENST00000429930 303 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 MTCO3P29-201ENST00000432119 779 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 AL591806.2-201ENST00000433122 173 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 Z82188.1-201ENST00000436709 154 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 snoU13.9-201ENST00000458927 103 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.37□□□□□ -2.19
RAB40BQ12829 Y_RNA.675-201ENST00000516389 149 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 RNU6-273P-201ENST00000516937 96 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 RNA5SP54-201ENST00000516951 92 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.37□□□□□ -2.19
RAB40BQ12829 AC124303.1-201ENST00000605703 360 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 BX248123.2-201ENST00000606318 124 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 AC006504.8-201ENST00000621046 635 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 AC006001.4-201ENST00000622243 395 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 AL078596.1-201ENST00000624856 447 ntBASIC1.37□□□□□ -2.19
RAB40BQ12829 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RAB40BQ12829 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RAB40BQ12829 AC006026.1-201ENST00000444025 1803 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 Y_RNA.89-201ENST00000363031 102 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 SNORD116-11-201ENST00000383882 92 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 MIR1304-201ENST00000408243 91 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.36□□□□□ -2.19
RAB40BQ12829 AC069257.2-201ENST00000441819 155 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.36□□□□□ -2.19
RAB40BQ12829 FO393415.2-201ENST00000480085 343 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 MTCYBP18-201ENST00000501056 747 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 RNU6-344P-201ENST00000516635 111 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 RNU1-117P-201ENST00000517041 158 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms