Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AC073413.2-201ENST00000604332 360 ntBASIC1.37□□□□□ -2.19
SMARCB1Q12824 AL133215.3-201ENST00000609801 448 ntBASIC1.37□□□□□ -2.19
SMARCB1Q12824 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.37□□□□□ -2.19
SMARCB1Q12824 RNU1-62P-201ENST00000362599 164 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 RNU6-439P-201ENST00000384188 106 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 Y_RNA.516-201ENST00000384541 124 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 MIR30A-201ENST00000385092 71 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 RNU6-332P-201ENST00000391193 108 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 RNU6-1093P-201ENST00000391194 107 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 NDUFA5P4-201ENST00000436704 385 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 MTCO1P44-201ENST00000441935 243 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 U8.21-201ENST00000459536 136 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 AC004223.1-201ENST00000479840 271 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 AC114801.2-201ENST00000503825 781 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 RNU6-720P-201ENST00000516363 108 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 RNU5F-4P-201ENST00000516581 114 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 AP003033.1-201ENST00000527244 415 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.36□□□□□ -2.19
SMARCB1Q12824 AC090617.10-201ENST00000624308 134 ntBASIC1.36□□□□□ -2.19
SMARCB1Q12824 MTND5P9-201ENST00000503854 1755 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 RNU6-545P-201ENST00000362681 104 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 SNORD50.1-201ENST00000362987 71 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 Y_RNA.151-201ENST00000363566 112 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 SNORD31B-201ENST00000364977 69 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 RNU6-214P-201ENST00000384130 107 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 RNU6-95P-201ENST00000384697 107 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 RNU6-1106P-201ENST00000390845 107 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.35□□□□□ -2.19
SMARCB1Q12824 AC099677.2-201ENST00000436385 175 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 AC079354.2-201ENST00000453523 154 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 RNU1-131P-201ENST00000458943 161 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 RPL36AP21-201ENST00000490372 323 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 AC091435.1-201ENST00000505442 584 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.35□□□□□ -2.19
SMARCB1Q12824 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.35□□□□□ -2.19
SMARCB1Q12824 RNU6-567P-201ENST00000516746 107 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 AC016256.1-201ENST00000547971 354 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 AC026371.1-201ENST00000551867 419 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.35□□□□□ -2.19
SMARCB1Q12824 CYP2C61P-201ENST00000604072 290 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 AC064807.4-201ENST00000607201 407 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 AL138726.1-201ENST00000614873 333 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 AC130454.1-201ENST00000622948 401 ntBASIC1.35□□□□□ -2.19
SMARCB1Q12824 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.35□□□□□ -2.19
SMARCB1Q12824 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SMARCB1Q12824 Y_RNA.135-201ENST00000363439 95 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 RNU6-968P-201ENST00000384076 107 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 RNU6-784P-201ENST00000384330 106 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 MIR521-1-201ENST00000384902 87 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SMARCB1Q12824 MTCO1P21-201ENST00000416634 589 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 RPL30P13-201ENST00000418873 348 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 SNRPEP10-201ENST00000420249 274 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 MTND3P21-201ENST00000433774 331 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.34□□□□□ -2.19
SMARCB1Q12824 MTCO1P29-201ENST00000496868 288 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.34□□□□□ -2.19
SMARCB1Q12824 AC097473.1-201ENST00000508142 408 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 SNORA31.17-201ENST00000516953 127 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 MTND1P35-201ENST00000526739 508 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.34□□□□□ -2.19
SMARCB1Q12824 SUB1P4-201ENST00000566062 339 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 MIR3672-201ENST00000584290 82 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 MIR3942-201ENST00000585264 109 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 AC010900.2-201ENST00000604508 210 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.34□□□□□ -2.19
SMARCB1Q12824 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SMARCB1Q12824 MIR8076-201ENST00000611401 83 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 AL136221.1-201ENST00000621449 509 ntBASIC1.34□□□□□ -2.19
SMARCB1Q12824 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.34□□□□□ -2.19
SMARCB1Q12824 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.34□□□□□ -2.2
SMARCB1Q12824 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
SMARCB1Q12824 CBX3P1-201ENST00000325243 554 ntBASIC1.33□□□□□ -2.2
SMARCB1Q12824 MIR424-201ENST00000362227 98 ntBASIC1.33□□□□□ -2.2
SMARCB1Q12824 RNU6-623P-201ENST00000363143 105 ntBASIC1.33□□□□□ -2.2
SMARCB1Q12824 Y_RNA.238-201ENST00000364441 102 ntBASIC1.33□□□□□ -2.2
SMARCB1Q12824 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.33□□□□□ -2.2
SMARCB1Q12824 MIR181A1-201ENST00000385026 110 ntBASIC1.33□□□□□ -2.2
SMARCB1Q12824 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.33□□□□□ -2.2
SMARCB1Q12824 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SMARCB1Q12824 RNA5SP494-201ENST00000410653 129 ntBASIC1.33□□□□□ -2.2
SMARCB1Q12824 Z82188.1-201ENST00000436709 154 ntBASIC1.33□□□□□ -2.2
SMARCB1Q12824 RPL31P58-201ENST00000469001 379 ntBASIC1.33□□□□□ -2.2
SMARCB1Q12824 RPS29P25-201ENST00000481709 171 ntBASIC1.33□□□□□ -2.2
SMARCB1Q12824 AC109635.3-201ENST00000529536 185 ntBASIC1.33□□□□□ -2.2
SMARCB1Q12824 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SMARCB1Q12824 FGF7P1-201ENST00000582820 288 ntBASIC1.33□□□□□ -2.2
SMARCB1Q12824 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.33□□□□□ -2.2
SMARCB1Q12824 AC068205.3-201ENST00000636385 468 ntBASIC1.33□□□□□ -2.2
SMARCB1Q12824 Y_RNA.212-201ENST00000364177 102 ntBASIC1.32□□□□□ -2.2
SMARCB1Q12824 RNU6-438P-201ENST00000365561 103 ntBASIC1.32□□□□□ -2.2
SMARCB1Q12824 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
SMARCB1Q12824 RPS26P42-201ENST00000413485 326 ntBASIC1.32□□□□□ -2.2
SMARCB1Q12824 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.32□□□□□ -2.2
SMARCB1Q12824 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.32□□□□□ -2.2
SMARCB1Q12824 MTCO3P8-201ENST00000453691 755 ntBASIC1.32□□□□□ -2.2
SMARCB1Q12824 AC087477.1-201ENST00000465747 340 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms