Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AL513477.1-202ENST00000417061 214 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 RAB28P5-201ENST00000427490 651 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 CYP2C59P-201ENST00000457790 269 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 SNORD127-201ENST00000458892 86 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 RPS23P5-201ENST00000495419 428 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.3□□□□□ -1.88
SSRP1Q08945 RNU5F-4P-201ENST00000516581 114 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 AC023157.2-201ENST00000540596 141 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.3□□□□□ -1.88
SSRP1Q08945 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.3□□□□□ -1.88
SSRP1Q08945 AC011373.1-201ENST00000607270 237 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 AC068205.3-201ENST00000636385 468 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.3□□□□□ -1.88
SSRP1Q08945 AC010615.1-201ENST00000594254 1764 ntBASIC3.3□□□□□ -1.88
SSRP1Q08945 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.3□□□□□ -1.88
SSRP1Q08945 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.29□□□□□ -1.88
SSRP1Q08945 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SSRP1Q08945 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSRP1Q08945 AC092593.1-201ENST00000515413 1815 ntBASIC3.29□□□□□ -1.88
SSRP1Q08945 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.29□□□□□ -1.88
SSRP1Q08945 AL139132.1-201ENST00000431587 344 ntBASIC3.29□□□□□ -1.88
SSRP1Q08945 AC009969.1-201ENST00000438726 172 ntBASIC3.29□□□□□ -1.88
SSRP1Q08945 RNU6-1132P-201ENST00000459214 107 ntBASIC3.29□□□□□ -1.88
SSRP1Q08945 CKS1BP2-201ENST00000497342 240 ntBASIC3.29□□□□□ -1.88
SSRP1Q08945 RNU6-496P-201ENST00000516145 99 ntBASIC3.29□□□□□ -1.88
SSRP1Q08945 RNU6-1098P-201ENST00000516772 96 ntBASIC3.29□□□□□ -1.88
SSRP1Q08945 RNU1-117P-201ENST00000517041 158 ntBASIC3.29□□□□□ -1.88
SSRP1Q08945 RNU6-1271P-201ENST00000517049 105 ntBASIC3.29□□□□□ -1.88
SSRP1Q08945 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.29□□□□□ -1.88
SSRP1Q08945 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.29□□□□□ -1.88
SSRP1Q08945 SNORD113-5-201ENST00000607261 78 ntBASIC3.29□□□□□ -1.88
SSRP1Q08945 Z82209.1-201ENST00000422141 2135 ntBASIC3.29□□□□□ -1.88
SSRP1Q08945 AL355596.1-201ENST00000565399 3996 ntBASIC3.28□□□□□ -1.88
SSRP1Q08945 AC009487.2-201ENST00000420969 6821 ntBASIC3.28□□□□□ -1.88
SSRP1Q08945 Y_RNA.307-201ENST00000365022 117 ntBASIC3.28□□□□□ -1.88
SSRP1Q08945 SNORA44-201ENST00000384584 132 ntBASIC3.28□□□□□ -1.88
SSRP1Q08945 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SSRP1Q08945 RNU2-38P-201ENST00000410856 79 ntBASIC3.28□□□□□ -1.88
SSRP1Q08945 BMS1P22-201ENST00000414726 313 ntBASIC3.28□□□□□ -1.88
SSRP1Q08945 AL161788.1-201ENST00000441805 169 ntBASIC3.28□□□□□ -1.88
SSRP1Q08945 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.28□□□□□ -1.88
SSRP1Q08945 SEPT14P8-201ENST00000508026 178 ntBASIC3.28□□□□□ -1.88
SSRP1Q08945 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.28□□□□□ -1.88
SSRP1Q08945 RNU7-110P-201ENST00000516891 62 ntBASIC3.28□□□□□ -1.88
SSRP1Q08945 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.28□□□□□ -1.88
SSRP1Q08945 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.28□□□□□ -1.88
SSRP1Q08945 AP001282.2-201ENST00000616149 309 ntBASIC3.28□□□□□ -1.88
SSRP1Q08945 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SSRP1Q08945 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.28□□□□□ -1.88
SSRP1Q08945 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSRP1Q08945 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSRP1Q08945 RNU4-90P-201ENST00000362773 141 ntBASIC3.27□□□□□ -1.89
SSRP1Q08945 SNORA72.2-201ENST00000365028 127 ntBASIC3.27□□□□□ -1.89
SSRP1Q08945 RNU6-1175P-201ENST00000365200 107 ntBASIC3.27□□□□□ -1.89
SSRP1Q08945 RNA5SP240-201ENST00000365355 128 ntBASIC3.27□□□□□ -1.89
SSRP1Q08945 RNU6-1310P-201ENST00000384153 107 ntBASIC3.27□□□□□ -1.89
SSRP1Q08945 RNU6-102P-201ENST00000384485 104 ntBASIC3.27□□□□□ -1.89
SSRP1Q08945 RNU6-21P-201ENST00000384710 107 ntBASIC3.27□□□□□ -1.89
SSRP1Q08945 MIR95-201ENST00000385072 81 ntBASIC3.27□□□□□ -1.89
SSRP1Q08945 RNU6-220P-201ENST00000390919 107 ntBASIC3.27□□□□□ -1.89
SSRP1Q08945 RNA5SP504-201ENST00000410676 117 ntBASIC3.27□□□□□ -1.89
SSRP1Q08945 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.27□□□□□ -1.89
SSRP1Q08945 MIR449C-201ENST00000516047 92 ntBASIC3.27□□□□□ -1.89
SSRP1Q08945 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.27□□□□□ -1.89
SSRP1Q08945 AL356280.1-201ENST00000603614 379 ntBASIC3.27□□□□□ -1.89
SSRP1Q08945 AC093732.2-201ENST00000607950 274 ntBASIC3.27□□□□□ -1.89
SSRP1Q08945 AC008873.1-201ENST00000625051 138 ntBASIC3.27□□□□□ -1.89
SSRP1Q08945 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.27□□□□□ -1.89
SSRP1Q08945 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.27□□□□□ -1.89
SSRP1Q08945 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SSRP1Q08945 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SSRP1Q08945 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SSRP1Q08945 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.26□□□□□ -1.89
SSRP1Q08945 MIR410-201ENST00000362222 80 ntBASIC3.26□□□□□ -1.89
SSRP1Q08945 Y_RNA.14-201ENST00000362415 103 ntBASIC3.26□□□□□ -1.89
SSRP1Q08945 SNORD87-201ENST00000364849 89 ntBASIC3.26□□□□□ -1.89
SSRP1Q08945 RNU6-290P-201ENST00000365212 101 ntBASIC3.26□□□□□ -1.89
SSRP1Q08945 RNU6-234P-201ENST00000365229 104 ntBASIC3.26□□□□□ -1.89
SSRP1Q08945 Y_RNA.350-201ENST00000365409 98 ntBASIC3.26□□□□□ -1.89
SSRP1Q08945 RNU6-1264P-201ENST00000383891 107 ntBASIC3.26□□□□□ -1.89
SSRP1Q08945 Y_RNA.541-201ENST00000384640 113 ntBASIC3.26□□□□□ -1.89
SSRP1Q08945 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.26□□□□□ -1.89
SSRP1Q08945 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.26□□□□□ -1.89
SSRP1Q08945 EEF1B2P7-201ENST00000451177 676 ntBASIC3.26□□□□□ -1.89
SSRP1Q08945 HSPE1P25-201ENST00000455484 251 ntBASIC3.26□□□□□ -1.89
SSRP1Q08945 AC091826.1-201ENST00000514065 313 ntBASIC3.26□□□□□ -1.89
SSRP1Q08945 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.26□□□□□ -1.89
SSRP1Q08945 MIR3674-201ENST00000636576 68 ntBASIC3.26□□□□□ -1.89
SSRP1Q08945 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.26□□□□□ -1.89
SSRP1Q08945 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.26□□□□□ -1.89
SSRP1Q08945 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.26□□□□□ -1.89
SSRP1Q08945 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSRP1Q08945 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSRP1Q08945 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SSRP1Q08945 MIR335-201ENST00000362173 94 ntBASIC3.25□□□□□ -1.89
SSRP1Q08945 SNORA67.2-201ENST00000384300 149 ntBASIC3.25□□□□□ -1.89
SSRP1Q08945 Y_RNA.476-201ENST00000384347 108 ntBASIC3.25□□□□□ -1.89
SSRP1Q08945 MIR181B1-201ENST00000385240 110 ntBASIC3.25□□□□□ -1.89
SSRP1Q08945 RNU4-30P-201ENST00000410245 143 ntBASIC3.25□□□□□ -1.89
SSRP1Q08945 RNU2-63P-201ENST00000410792 194 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms