Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH1Q08174 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH1Q08174 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH1Q08174 RNU1-105P-201ENST00000363470 161 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 RNU6-728P-201ENST00000365375 104 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 SNORD116-14-201ENST00000383894 92 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 SNORD116-17-201ENST00000383929 92 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 SNORD116-15-201ENST00000384445 92 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 SNORD20-201ENST00000384550 80 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 Y_RNA.542-201ENST00000384641 111 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 SNORD116-19-201ENST00000384729 92 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 AL355796.1-201ENST00000406706 323 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 MIR1283-1-201ENST00000408494 87 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 RNU6-383P-201ENST00000410864 94 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 AC002075.2-201ENST00000425207 252 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 RPL23AP58-201ENST00000440453 469 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH1Q08174 HSPE1P13-201ENST00000451143 297 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 RNU6-1211P-201ENST00000459179 105 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 AC114982.1-201ENST00000469402 321 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 AC117454.1-201ENST00000491120 168 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH1Q08174 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH1Q08174 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH1Q08174 RNU6-561P-201ENST00000516222 102 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 RNU7-115P-201ENST00000516433 55 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 RNU6-579P-201ENST00000516879 102 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH1Q08174 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH1Q08174 MIR5685-201ENST00000579080 79 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 MIR4429-201ENST00000580105 73 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDH1Q08174 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 AC090517.3-201ENST00000625170 141 ntBASIC3.58□□□□□ -1.84
PCDH1Q08174 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PCDH1Q08174 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PCDH1Q08174 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PCDH1Q08174 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH1Q08174 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDH1Q08174 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDH1Q08174 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.57□□□□□ -1.84
PCDH1Q08174 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDH1Q08174 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDH1Q08174 CEP170P1-201ENST00000502249 4587 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 RNU6-283P-201ENST00000364788 107 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 Y_RNA.353-201ENST00000365440 108 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 MIR518C-201ENST00000384822 101 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 MIR670-201ENST00000390142 98 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PCDH1Q08174 MIR300-201ENST00000401138 83 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 SNORA36B-201ENST00000410438 131 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 AC006989.1-201ENST00000427212 131 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 NDUFB1P1-201ENST00000435191 180 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 AL121890.1-201ENST00000435457 205 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 RPS29P7-201ENST00000439662 171 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 RNU7-197P-201ENST00000458836 62 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 RNU6-1337P-201ENST00000516525 95 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.57□□□□□ -1.84
PCDH1Q08174 AC022695.1-201ENST00000522089 237 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDH1Q08174 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.57□□□□□ -1.84
PCDH1Q08174 AC103810.1-201ENST00000579873 453 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDH1Q08174 TUG1_4.1-201ENST00000619464 181 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 AC012640.5-201ENST00000623897 319 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 AP000553.6-201ENST00000641242 118 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDH1Q08174 AL356274.2-201ENST00000624379 3752 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 AL159152.1-201ENST00000635019 2587 ntBASIC3.57□□□□□ -1.84
PCDH1Q08174 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDH1Q08174 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDH1Q08174 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.56□□□□□ -1.84
PCDH1Q08174 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PCDH1Q08174 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDH1Q08174 RNA5SP42-201ENST00000364278 115 ntBASIC3.56□□□□□ -1.84
PCDH1Q08174 SNORA20B-201ENST00000384220 132 ntBASIC3.56□□□□□ -1.84
PCDH1Q08174 MIR30B-201ENST00000384850 88 ntBASIC3.56□□□□□ -1.84
PCDH1Q08174 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDH1Q08174 RNU7-14P-201ENST00000459331 62 ntBASIC3.56□□□□□ -1.84
PCDH1Q08174 RNU7-57P-201ENST00000459540 60 ntBASIC3.56□□□□□ -1.84
PCDH1Q08174 RNU6-1234P-201ENST00000516877 103 ntBASIC3.56□□□□□ -1.84
PCDH1Q08174 RNU1-45P-201ENST00000517191 141 ntBASIC3.56□□□□□ -1.84
PCDH1Q08174 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDH1Q08174 MIR3646-201ENST00000578301 84 ntBASIC3.56□□□□□ -1.84
PCDH1Q08174 MIR4765-201ENST00000585007 77 ntBASIC3.56□□□□□ -1.84
PCDH1Q08174 MIR4753-201ENST00000585119 83 ntBASIC3.56□□□□□ -1.84
PCDH1Q08174 AC058791.1-201ENST00000608412 3198 ntBASIC3.56□□□□□ -1.84
PCDH1Q08174 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDH1Q08174 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCDH1Q08174 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
PCDH1Q08174 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDH1Q08174 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDH1Q08174 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCDH1Q08174 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDH1Q08174 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PCDH1Q08174 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDH1Q08174 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PCDH1Q08174 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDH1Q08174 ZNF702P-202ENST00000434269 1966 ntBASIC3.55□□□□□ -1.84
PCDH1Q08174 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms