| APLP2 | Q06481 | U6.73-201 | ENST00000619194 | 103 nt | BASIC | 6.68 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | EPC1-203 | ENST00000375110 | 3909 nt | TSL 1 (best) BASIC | 6.68 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | KCNJ13-201 | ENST00000233826 | 2950 nt | APPRIS P1 TSL 1 (best) BASIC | 6.68 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | GDAP2-202 | ENST00000369443 | 8828 nt | APPRIS P1 TSL 2 BASIC | 6.68 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | LINC01733-201 | ENST00000449316 | 4604 nt | TSL 1 (best) BASIC | 6.67 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | TAB3-204 | ENST00000378932 | 3698 nt | TSL 1 (best) BASIC | 6.67 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | OR9K2-202 | ENST00000641329 | 3120 nt | APPRIS P1 BASIC | 6.67 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | MIR586-201 | ENST00000385035 | 97 nt | BASIC | 6.67 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | RNA5SP146-201 | ENST00000410743 | 123 nt | BASIC | 6.67 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | HMGN2P10-201 | ENST00000448085 | 265 nt | BASIC | 6.67 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | RBMY2UP-201 | ENST00000453474 | 324 nt | BASIC | 6.67 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | CCL14-203 | ENST00000620991 | 426 nt | TSL 1 (best) BASIC | 6.67 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | AC091304.10-201 | ENST00000641554 | 121 nt | BASIC | 6.67 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | MPDZ-215 | ENST00000541718 | 7603 nt | APPRIS P3 TSL 1 (best) BASIC | 6.67 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | MARCH1-201 | ENST00000274056 | 5367 nt | APPRIS P1 TSL 4 BASIC | 6.67 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | FASTKD1-205 | ENST00000453929 | 2791 nt | TSL 2 BASIC | 6.67 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | KATNAL1-201 | ENST00000380615 | 7551 nt | APPRIS P1 TSL 1 (best) BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | OR4M1-202 | ENST00000641200 | 3493 nt | APPRIS P1 BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | PTCD2-202 | ENST00000380639 | 11151 nt | APPRIS P1 TSL 5 BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | AC093274.1-201 | ENST00000503488 | 5454 nt | TSL 5 BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | SNORA51.4-201 | ENST00000364993 | 124 nt | BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | SNORA70C-201 | ENST00000384538 | 135 nt | BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | LINC01341-201 | ENST00000419361 | 552 nt | TSL 2 BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | AC008155.2-201 | ENST00000464337 | 397 nt | BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | AC010255.2-201 | ENST00000505209 | 428 nt | TSL 3 BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | RNU7-6P-201 | ENST00000516845 | 62 nt | BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | RN7SKP57-201 | ENST00000517248 | 293 nt | BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | AC024220.1-201 | ENST00000603675 | 484 nt | BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | MIR8059-201 | ENST00000620427 | 81 nt | BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | FGD4-213 | ENST00000546442 | 3503 nt | TSL 5 BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | TDRD1-202 | ENST00000369280 | 4062 nt | APPRIS ALT2 TSL 5 BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | F8-202 | ENST00000360256 | 9059 nt | APPRIS P1 TSL 1 (best) BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | TOPORSLP1-203 | ENST00000493279 | 2871 nt | TSL 4 BASIC | 6.66 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | ZNF415-224 | ENST00000601493 | 2132 nt | TSL 1 (best) BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | QSER1-201 | ENST00000399302 | 9335 nt | APPRIS P1 TSL 1 (best) BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | G2E3-201 | ENST00000206595 | 5804 nt | APPRIS P1 TSL 1 (best) BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | KYNU-201 | ENST00000264170 | 15316 nt | APPRIS P1 TSL 1 (best) BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | ANO3-204 | ENST00000531568 | 3117 nt | APPRIS ALT2 TSL 2 BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | SNORA31-201 | ENST00000362607 | 130 nt | BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | Y_RNA.94-201 | ENST00000363068 | 106 nt | BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | RPS26P8-201 | ENST00000393490 | 348 nt | BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | AC096949.1-201 | ENST00000412047 | 152 nt | BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | ABCF2P2-201 | ENST00000450549 | 296 nt | BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | RPS29P19-201 | ENST00000479709 | 171 nt | BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | AC010598.1-201 | ENST00000510378 | 103 nt | BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | MRPS17P9-201 | ENST00000511924 | 393 nt | BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | RFESD-202 | ENST00000380005 | 2587 nt | TSL 2 BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | CNOT1-201 | ENST00000317147 | 8471 nt | APPRIS P3 TSL 1 (best) BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | PCDH11X-205 | ENST00000373094 | 9179 nt | APPRIS P4 TSL 1 (best) BASIC | 6.65 | □□□□□ -1.34 | | |
| APLP2 | Q06481 | SEC31A-203 | ENST00000348405 | 4012 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.65 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RAP2C-AS1-202 | ENST00000441399 | 3473 nt | TSL 2 BASIC | 6.65 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | KCNJ16-211 | ENST00000615244 | 4190 nt | APPRIS P1 TSL 4 BASIC | 6.65 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | WDR72-204 | ENST00000559418 | 3602 nt | TSL 5 BASIC | 6.64 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | OTOGL-202 | ENST00000458043 | 8083 nt | APPRIS P5 TSL 5 BASIC | 6.64 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | SPRR2E-201 | ENST00000368750 | 678 nt | APPRIS P1 TSL 1 (best) BASIC | 6.64 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | MIR577-201 | ENST00000385196 | 96 nt | BASIC | 6.64 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RPL23AP46-201 | ENST00000438548 | 490 nt | BASIC | 6.64 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RPS4XP11-201 | ENST00000446897 | 772 nt | BASIC | 6.64 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RN7SL817P-201 | ENST00000480777 | 288 nt | BASIC | 6.64 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | Y_RNA.666-201 | ENST00000516187 | 112 nt | BASIC | 6.64 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | AC021739.1-201 | ENST00000559631 | 174 nt | BASIC | 6.64 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | SMC6-203 | ENST00000402989 | 3729 nt | APPRIS P1 TSL 2 BASIC | 6.64 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | TUG1-202 | ENST00000521091 | 2110 nt | TSL 1 (best) BASIC | 6.64 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | GABRG2-210 | ENST00000638772 | 7669 nt | TSL 5 BASIC | 6.63 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | Y_RNA.454-201 | ENST00000384224 | 113 nt | BASIC | 6.63 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RPS12P18-201 | ENST00000442381 | 270 nt | BASIC | 6.63 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | AC105398.1-201 | ENST00000446073 | 402 nt | TSL 5 BASIC | 6.63 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | NDUFA4P2-201 | ENST00000489989 | 244 nt | BASIC | 6.63 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | U2SURP-214 | ENST00000493598 | 3491 nt | TSL 5 BASIC | 6.63 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | AC078918.1-201 | ENST00000498515 | 228 nt | BASIC | 6.63 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | AC099522.1-202 | ENST00000514718 | 367 nt | BASIC | 6.63 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | MIR4777-201 | ENST00000583710 | 86 nt | BASIC | 6.63 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | ST7-OT3_3.1-201 | ENST00000611709 | 115 nt | BASIC | 6.63 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | JPX_2.1-201 | ENST00000614161 | 69 nt | BASIC | 6.63 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | AC244196.2-201 | ENST00000621184 | 411 nt | APPRIS P1 BASIC | 6.63 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | SEC31A-215 | ENST00000505472 | 4159 nt | TSL 5 BASIC | 6.63 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | CADM2-AS1-201 | ENST00000476021 | 2656 nt | TSL 1 (best) BASIC | 6.63 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | AK9-202 | ENST00000355283 | 2499 nt | TSL 1 (best) BASIC | 6.62 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RNU6-349P-201 | ENST00000362402 | 107 nt | BASIC | 6.62 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RNU6-832P-201 | ENST00000363319 | 107 nt | BASIC | 6.62 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RNU6-60P-201 | ENST00000364792 | 103 nt | BASIC | 6.62 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RNA5SP372-201 | ENST00000390836 | 115 nt | BASIC | 6.62 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RNU6-1197P-201 | ENST00000391183 | 107 nt | BASIC | 6.62 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | ZC3H7A-202 | ENST00000396516 | 3845 nt | APPRIS P1 TSL 1 (best) BASIC | 6.62 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | MIR1179-201 | ENST00000408703 | 91 nt | BASIC | 6.62 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | AL365434.1-201 | ENST00000412362 | 380 nt | TSL 3 BASIC | 6.62 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | snoU13.4-201 | ENST00000458916 | 104 nt | BASIC | 6.62 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RNU7-57P-201 | ENST00000459540 | 60 nt | BASIC | 6.62 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RPL29-203 | ENST00000475248 | 551 nt | APPRIS P1 TSL 3 BASIC | 6.62 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RNU6-693P-201 | ENST00000516134 | 107 nt | BASIC | 6.62 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | AC102945.1-201 | ENST00000522640 | 407 nt | TSL 2 BASIC | 6.62 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | OR56A1-203 | ENST00000641900 | 8448 nt | APPRIS P1 BASIC | 6.61 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | SELENOI-201 | ENST00000260585 | 8101 nt | APPRIS P2 TSL 1 (best) BASIC | 6.61 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RNU1-15P-201 | ENST00000353977 | 144 nt | BASIC | 6.61 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RNU6-888P-201 | ENST00000363010 | 101 nt | BASIC | 6.61 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RNU6-1229P-201 | ENST00000364295 | 107 nt | BASIC | 6.61 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | RNU6-117P-201 | ENST00000365415 | 107 nt | BASIC | 6.61 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | AC009238.1-201 | ENST00000442165 | 424 nt | BASIC | 6.61 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | AC009237.6-201 | ENST00000446969 | 424 nt | BASIC | 6.61 | □□□□□ -1.35 | | |
| APLP2 | Q06481 | AC100770.1-201 | ENST00000532310 | 322 nt | BASIC | 6.61 | □□□□□ -1.35 | | |