Protein–RNA interactions for Protein: Q01955

COL4A3, Collagen alpha-3(IV) chain, humanhuman

Predictions only

Length 1,670 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3Q01955 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL4A3Q01955 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL4A3Q01955 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL4A3Q01955 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.91□□□□□ -1.94
COL4A3Q01955 RNA5SP383-201ENST00000362934 120 ntBASIC2.91□□□□□ -1.94
COL4A3Q01955 Y_RNA.398-201ENST00000383952 99 ntBASIC2.91□□□□□ -1.94
COL4A3Q01955 RNU6-1081P-201ENST00000384537 107 ntBASIC2.91□□□□□ -1.94
COL4A3Q01955 MIR196B-201ENST00000384852 84 ntBASIC2.91□□□□□ -1.94
COL4A3Q01955 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.91□□□□□ -1.94
COL4A3Q01955 RN7SKP192-201ENST00000411291 327 ntBASIC2.91□□□□□ -1.94
COL4A3Q01955 RNU6-625P-201ENST00000459412 107 ntBASIC2.91□□□□□ -1.94
COL4A3Q01955 RN7SL75P-201ENST00000461926 281 ntBASIC2.91□□□□□ -1.94
COL4A3Q01955 AC003982.1-202ENST00000469928 248 ntBASIC2.91□□□□□ -1.94
COL4A3Q01955 RNU6-928P-201ENST00000516876 104 ntBASIC2.91□□□□□ -1.94
COL4A3Q01955 AC090897.2-201ENST00000581715 130 ntBASIC2.91□□□□□ -1.94
COL4A3Q01955 AC092628.2-201ENST00000622492 339 ntBASIC2.91□□□□□ -1.94
COL4A3Q01955 MIR3199-2-201ENST00000636243 86 ntBASIC2.91□□□□□ -1.94
COL4A3Q01955 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
COL4A3Q01955 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
COL4A3Q01955 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
COL4A3Q01955 ZNF658B-202ENST00000615961 3375 ntBASIC2.9□□□□□ -1.94
COL4A3Q01955 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
COL4A3Q01955 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
COL4A3Q01955 AC091564.4-201ENST00000533934 2194 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 Y_RNA.217-201ENST00000364214 105 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 RNU4-56P-201ENST00000364700 142 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 MIR9-1-201ENST00000385198 89 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 RNU6-1248P-201ENST00000391096 64 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 RPL21P3-201ENST00000395517 478 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 ELOCP21-201ENST00000412558 336 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.9□□□□□ -1.95
COL4A3Q01955 AL451074.5-201ENST00000415894 435 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 AC099548.1-201ENST00000421443 426 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.9□□□□□ -1.95
COL4A3Q01955 AC009237.7-201ENST00000447357 229 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 Y_RNA.641-201ENST00000459414 105 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 AC245166.1-201ENST00000521012 253 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 MIR4308-201ENST00000580634 81 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 AC108706.1-201ENST00000611053 297 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 AL365265.1-201ENST00000621045 234 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COL4A3Q01955 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.9□□□□□ -1.95
COL4A3Q01955 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL4A3Q01955 AC099654.7-201ENST00000635788 2127 ntBASIC2.9□□□□□ -1.95
COL4A3Q01955 Y_RNA.101-201ENST00000363154 102 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 RNU6-81P-201ENST00000365608 104 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 RNU6-245P-201ENST00000384020 107 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 RNU6-211P-201ENST00000384047 107 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 Y_RNA.435-201ENST00000384095 112 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 AL512633.1-201ENST00000399931 655 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 RPS26P42-201ENST00000413485 326 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 YPEL5P1-201ENST00000419731 367 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 AC019205.3-201ENST00000424573 156 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 AC009414.1-201ENST00000427200 443 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 RNU6-1219P-201ENST00000516143 112 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 AC115990.1-201ENST00000526957 301 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.89□□□□□ -1.95
COL4A3Q01955 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.89□□□□□ -1.95
COL4A3Q01955 AC055872.1-201ENST00000570978 278 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 SNRPGP20-201ENST00000604477 205 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 AC068831.7-201ENST00000616954 363 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 AC091932.3-201ENST00000624223 323 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.89□□□□□ -1.95
COL4A3Q01955 CUL1P1-201ENST00000509510 2425 ntBASIC2.89□□□□□ -1.95
COL4A3Q01955 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.89□□□□□ -1.95
COL4A3Q01955 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.89□□□□□ -1.95
COL4A3Q01955 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL4A3Q01955 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.89□□□□□ -1.95
COL4A3Q01955 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
COL4A3Q01955 MIR320B2-201ENST00000408479 138 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 RPS27P29-201ENST00000463110 252 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.88□□□□□ -1.95
COL4A3Q01955 AIG1P1-201ENST00000503376 148 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.88□□□□□ -1.95
COL4A3Q01955 ACA59.2-201ENST00000517061 156 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 AC015712.3-201ENST00000559380 164 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.88□□□□□ -1.95
COL4A3Q01955 MIR4644-201ENST00000579929 84 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 AC006380.1-201ENST00000603598 186 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.88□□□□□ -1.95
COL4A3Q01955 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.88□□□□□ -1.95
COL4A3Q01955 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COL4A3Q01955 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL4A3Q01955 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL4A3Q01955 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.88□□□□□ -1.95
COL4A3Q01955 MAPK10-362ENST00000641864 4484 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL4A3Q01955 RNA5SP99-201ENST00000364020 114 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 RNU6-487P-201ENST00000365430 104 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 Y_RNA.441-201ENST00000384123 112 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 RNU6-793P-201ENST00000384233 104 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 SNORA26.3-201ENST00000391119 136 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 RNU6-1199P-201ENST00000411249 104 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 RAB28P5-201ENST00000427490 651 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 HMGB3P3-201ENST00000510526 400 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 RNU1-61P-201ENST00000516107 151 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 SNORA31.16-201ENST00000516773 139 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 CYP4A27P-201ENST00000567218 190 ntBASIC2.88□□□□□ -1.95
COL4A3Q01955 MIR3923-201ENST00000579521 83 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms