Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 TCL6_2.1-201ENST00000615162 119 ntBASIC2.91□□□□□ -1.94
CDC42EP1Q00587 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDC42EP1Q00587 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDC42EP1Q00587 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDC42EP1Q00587 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDC42EP1Q00587 RNU1-62P-201ENST00000362599 164 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 Y_RNA.461-201ENST00000384263 103 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 RNU6-505P-201ENST00000384427 107 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 RNU6-1274P-201ENST00000384557 107 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.9□□□□□ -1.95
CDC42EP1Q00587 AC244505.4-201ENST00000434905 287 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 SSXP5-201ENST00000443473 287 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 UQCRBP2-201ENST00000447827 297 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 AC007395.1-201ENST00000451333 677 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 PCNPP5-201ENST00000452246 481 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 AC090515.1-201ENST00000465295 476 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 RNU6-586P-201ENST00000517265 104 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.9□□□□□ -1.95
CDC42EP1Q00587 DEFB131C-201ENST00000528817 165 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.9□□□□□ -1.95
CDC42EP1Q00587 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.9□□□□□ -1.95
CDC42EP1Q00587 AC023043.3-201ENST00000593113 385 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 AC078899.3-201ENST00000599065 212 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 AL357075.2-201ENST00000614906 189 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 MIR6817-201ENST00000615588 66 ntBASIC2.9□□□□□ -1.95
CDC42EP1Q00587 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CDC42EP1Q00587 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CDC42EP1Q00587 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDC42EP1Q00587 SNORD32B-201ENST00000364460 84 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 Y_RNA.396-201ENST00000383949 103 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 Y_RNA.401-201ENST00000383965 117 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 MIR1302-6-201ENST00000408466 90 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 RNU2-20P-201ENST00000410425 191 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 RNU6-121P-201ENST00000410525 99 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 BMS1P22-201ENST00000414726 313 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.89□□□□□ -1.95
CDC42EP1Q00587 IFNA11P-201ENST00000446352 526 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 AL513328.1-201ENST00000446460 224 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.89□□□□□ -1.95
CDC42EP1Q00587 AC092185.1-201ENST00000491371 97 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 CKS1BP2-201ENST00000497342 240 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 AC025465.3-201ENST00000510570 311 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 RNU6-408P-201ENST00000515910 100 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 RNU2-44P-201ENST00000516795 194 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 CYCSP23-201ENST00000519781 313 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 RRN3P3-201ENST00000549207 578 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 AC136932.1-201ENST00000574771 208 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.89□□□□□ -1.95
CDC42EP1Q00587 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.89□□□□□ -1.95
CDC42EP1Q00587 LINC02555-201ENST00000563933 1951 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.89□□□□□ -1.95
CDC42EP1Q00587 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDC42EP1Q00587 AC092435.3-201ENST00000565538 3654 ntBASIC2.88□□□□□ -1.95
CDC42EP1Q00587 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CDC42EP1Q00587 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDC42EP1Q00587 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDC42EP1Q00587 RNU6-937P-201ENST00000384325 106 ntBASIC2.88□□□□□ -1.95
CDC42EP1Q00587 MIR27B-201ENST00000385129 97 ntBASIC2.88□□□□□ -1.95
CDC42EP1Q00587 FO393413.1-201ENST00000402892 195 ntBASIC2.88□□□□□ -1.95
CDC42EP1Q00587 AL033519.2-201ENST00000403958 392 ntBASIC2.88□□□□□ -1.95
CDC42EP1Q00587 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.88□□□□□ -1.95
CDC42EP1Q00587 AL513477.1-202ENST00000417061 214 ntBASIC2.88□□□□□ -1.95
CDC42EP1Q00587 RPL21P38-201ENST00000418090 167 ntBASIC2.88□□□□□ -1.95
CDC42EP1Q00587 AC009237.7-201ENST00000447357 229 ntBASIC2.88□□□□□ -1.95
CDC42EP1Q00587 RNU6-570P-201ENST00000517051 105 ntBASIC2.88□□□□□ -1.95
CDC42EP1Q00587 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.88□□□□□ -1.95
CDC42EP1Q00587 MIR4300-201ENST00000581016 96 ntBASIC2.88□□□□□ -1.95
CDC42EP1Q00587 MIR4635-201ENST00000583759 79 ntBASIC2.88□□□□□ -1.95
CDC42EP1Q00587 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.88□□□□□ -1.95
CDC42EP1Q00587 MIR5739-201ENST00000619803 80 ntBASIC2.88□□□□□ -1.95
CDC42EP1Q00587 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.88□□□□□ -1.95
CDC42EP1Q00587 U6.104-201ENST00000637979 90 ntBASIC2.88□□□□□ -1.95
CDC42EP1Q00587 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.88□□□□□ -1.95
CDC42EP1Q00587 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CDC42EP1Q00587 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CDC42EP1Q00587 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.87□□□□□ -1.95
CDC42EP1Q00587 RNU4-82P-201ENST00000362443 140 ntBASIC2.87□□□□□ -1.95
CDC42EP1Q00587 RNU6-944P-201ENST00000364023 107 ntBASIC2.87□□□□□ -1.95
CDC42EP1Q00587 MIR1294-201ENST00000408503 142 ntBASIC2.87□□□□□ -1.95
CDC42EP1Q00587 AC004866.1-201ENST00000411748 78 ntBASIC2.87□□□□□ -1.95
CDC42EP1Q00587 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.87□□□□□ -1.95
CDC42EP1Q00587 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.87□□□□□ -1.95
CDC42EP1Q00587 AC080013.2-201ENST00000460866 323 ntBASIC2.87□□□□□ -1.95
CDC42EP1Q00587 RPL26P26-201ENST00000480251 434 ntBASIC2.87□□□□□ -1.95
CDC42EP1Q00587 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.87□□□□□ -1.95
CDC42EP1Q00587 SNORD11B-201ENST00000607707 90 ntBASIC2.87□□□□□ -1.95
CDC42EP1Q00587 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.87□□□□□ -1.95
CDC42EP1Q00587 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.87□□□□□ -1.95
CDC42EP1Q00587 AC107871.2-201ENST00000612894 502 ntBASIC2.87□□□□□ -1.95
CDC42EP1Q00587 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.87□□□□□ -1.95
CDC42EP1Q00587 U4.3-201ENST00000621047 82 ntBASIC2.87□□□□□ -1.95
CDC42EP1Q00587 CTSLP2-204ENST00000629029 392 ntBASIC2.87□□□□□ -1.95
CDC42EP1Q00587 IGHVIII-44-202ENST00000636235 289 ntBASIC2.87□□□□□ -1.95
CDC42EP1Q00587 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CDC42EP1Q00587 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDC42EP1Q00587 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.87□□□□□ -1.95
CDC42EP1Q00587 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDC42EP1Q00587 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms