Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNU2-63P-201ENST00000410792 194 ntBASIC2.51□□□□□ -2.01
RAE1P78406 RNA5SP492-201ENST00000411330 114 ntBASIC2.51□□□□□ -2.01
RAE1P78406 AC003685.2-201ENST00000422795 395 ntBASIC2.51□□□□□ -2.01
RAE1P78406 AC005002.2-201ENST00000438228 269 ntBASIC2.51□□□□□ -2.01
RAE1P78406 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.51□□□□□ -2.01
RAE1P78406 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.51□□□□□ -2.01
RAE1P78406 LINC01399-202ENST00000458450 244 ntBASIC2.51□□□□□ -2.01
RAE1P78406 RNA5SP367-201ENST00000516557 118 ntBASIC2.51□□□□□ -2.01
RAE1P78406 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.51□□□□□ -2.01
RAE1P78406 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.51□□□□□ -2.01
RAE1P78406 MIR4300-201ENST00000581016 96 ntBASIC2.51□□□□□ -2.01
RAE1P78406 AC090616.3-201ENST00000582184 217 ntBASIC2.51□□□□□ -2.01
RAE1P78406 AL161756.2-201ENST00000604597 246 ntBASIC2.51□□□□□ -2.01
RAE1P78406 AL033523.1-201ENST00000605153 153 ntBASIC2.51□□□□□ -2.01
RAE1P78406 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.51□□□□□ -2.01
RAE1P78406 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.51□□□□□ -2.01
RAE1P78406 MIR376A1-201ENST00000616574 68 ntBASIC2.51□□□□□ -2.01
RAE1P78406 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.51□□□□□ -2.01
RAE1P78406 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RAE1P78406 Y_RNA.26-201ENST00000362539 101 ntBASIC2.5□□□□□ -2.01
RAE1P78406 Y_RNA.143-201ENST00000363520 106 ntBASIC2.5□□□□□ -2.01
RAE1P78406 RNU6-727P-201ENST00000363592 107 ntBASIC2.5□□□□□ -2.01
RAE1P78406 RNU6-806P-201ENST00000365147 105 ntBASIC2.5□□□□□ -2.01
RAE1P78406 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RAE1P78406 SNORD63-201ENST00000384262 68 ntBASIC2.5□□□□□ -2.01
RAE1P78406 RNU6-574P-201ENST00000384265 107 ntBASIC2.5□□□□□ -2.01
RAE1P78406 Y_RNA.462-201ENST00000384268 102 ntBASIC2.5□□□□□ -2.01
RAE1P78406 Y_RNA.512-201ENST00000384518 102 ntBASIC2.5□□□□□ -2.01
RAE1P78406 MIR9-1-201ENST00000385198 89 ntBASIC2.5□□□□□ -2.01
RAE1P78406 AC105272.1-201ENST00000438604 198 ntBASIC2.5□□□□□ -2.01
RAE1P78406 AC107083.1-201ENST00000439643 279 ntBASIC2.5□□□□□ -2.01
RAE1P78406 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.5□□□□□ -2.01
RAE1P78406 IPO7P1-201ENST00000442031 636 ntBASIC2.5□□□□□ -2.01
RAE1P78406 RN7SL499P-201ENST00000481141 276 ntBASIC2.5□□□□□ -2.01
RAE1P78406 CKS1BP2-201ENST00000497342 240 ntBASIC2.5□□□□□ -2.01
RAE1P78406 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.5□□□□□ -2.01
RAE1P78406 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.5□□□□□ -2.01
RAE1P78406 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.5□□□□□ -2.01
RAE1P78406 AP003733.2-201ENST00000529409 171 ntBASIC2.5□□□□□ -2.01
RAE1P78406 AK6P2-201ENST00000549020 471 ntBASIC2.5□□□□□ -2.01
RAE1P78406 RRN3P3-201ENST00000549207 578 ntBASIC2.5□□□□□ -2.01
RAE1P78406 AC018448.1-201ENST00000552843 316 ntBASIC2.5□□□□□ -2.01
RAE1P78406 MIR4423-201ENST00000580922 80 ntBASIC2.5□□□□□ -2.01
RAE1P78406 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.5□□□□□ -2.01
RAE1P78406 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.5□□□□□ -2.01
RAE1P78406 AC068205.3-201ENST00000636385 468 ntBASIC2.5□□□□□ -2.01
RAE1P78406 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.5□□□□□ -2.01
RAE1P78406 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RAE1P78406 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
RAE1P78406 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.5□□□□□ -2.01
RAE1P78406 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.49□□□□□ -2.01
RAE1P78406 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.49□□□□□ -2.01
RAE1P78406 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.49□□□□□ -2.01
RAE1P78406 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.49□□□□□ -2.01
RAE1P78406 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.49□□□□□ -2.01
RAE1P78406 Y_RNA.64-201ENST00000362845 102 ntBASIC2.49□□□□□ -2.01
RAE1P78406 RNU6-961P-201ENST00000363893 105 ntBASIC2.49□□□□□ -2.01
RAE1P78406 RNU6-702P-201ENST00000364982 107 ntBASIC2.49□□□□□ -2.01
RAE1P78406 RNU6-234P-201ENST00000365229 104 ntBASIC2.49□□□□□ -2.01
RAE1P78406 Y_RNA.415-201ENST00000384012 112 ntBASIC2.49□□□□□ -2.01
RAE1P78406 SNORD115-46-201ENST00000390982 71 ntBASIC2.49□□□□□ -2.01
RAE1P78406 AL033519.2-201ENST00000403958 392 ntBASIC2.49□□□□□ -2.01
RAE1P78406 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RAE1P78406 RNA5SP504-201ENST00000410676 117 ntBASIC2.49□□□□□ -2.01
RAE1P78406 AC092427.1-202ENST00000430569 476 ntBASIC2.49□□□□□ -2.01
RAE1P78406 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.49□□□□□ -2.01
RAE1P78406 AL445687.1-201ENST00000439946 251 ntBASIC2.49□□□□□ -2.01
RAE1P78406 RNU6-625P-201ENST00000459412 107 ntBASIC2.49□□□□□ -2.01
RAE1P78406 RPS23P5-201ENST00000495419 428 ntBASIC2.49□□□□□ -2.01
RAE1P78406 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.49□□□□□ -2.01
RAE1P78406 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.49□□□□□ -2.01
RAE1P78406 RNU6-408P-201ENST00000515910 100 ntBASIC2.49□□□□□ -2.01
RAE1P78406 RNA5SP282-201ENST00000516355 108 ntBASIC2.49□□□□□ -2.01
RAE1P78406 RNU5F-4P-201ENST00000516581 114 ntBASIC2.49□□□□□ -2.01
RAE1P78406 RNU6-1098P-201ENST00000516772 96 ntBASIC2.49□□□□□ -2.01
RAE1P78406 AC022616.8-201ENST00000533569 253 ntBASIC2.49□□□□□ -2.01
RAE1P78406 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.49□□□□□ -2.01
RAE1P78406 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
RAE1P78406 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.49□□□□□ -2.01
RAE1P78406 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
RAE1P78406 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
RAE1P78406 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
RAE1P78406 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.49□□□□□ -2.01
RAE1P78406 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RAE1P78406 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RAE1P78406 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RAE1P78406 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.49□□□□□ -2.01
RAE1P78406 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
RAE1P78406 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.48□□□□□ -2.01
RAE1P78406 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RAE1P78406 Y_RNA.222-201ENST00000364264 102 ntBASIC2.48□□□□□ -2.01
RAE1P78406 Y_RNA.230-201ENST00000364348 109 ntBASIC2.48□□□□□ -2.01
RAE1P78406 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.48□□□□□ -2.01
RAE1P78406 SNORA67.2-201ENST00000384300 149 ntBASIC2.48□□□□□ -2.01
RAE1P78406 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RAE1P78406 RNU2-25P-201ENST00000411041 191 ntBASIC2.48□□□□□ -2.01
RAE1P78406 ELOCP21-201ENST00000412558 336 ntBASIC2.48□□□□□ -2.01
RAE1P78406 ARL5AP4-201ENST00000430731 512 ntBASIC2.48□□□□□ -2.01
RAE1P78406 RPL39P40-201ENST00000445481 146 ntBASIC2.48□□□□□ -2.01
RAE1P78406 RPS27AP9-201ENST00000477681 438 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms