Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RNU6-1211P-201ENST00000459179 105 ntBASIC3.32□□□□□ -1.88
YBX1P67809 AC114982.1-201ENST00000469402 321 ntBASIC3.32□□□□□ -1.88
YBX1P67809 RNU2-27P-201ENST00000516185 142 ntBASIC3.32□□□□□ -1.88
YBX1P67809 HIGD1AP1-201ENST00000550979 275 ntBASIC3.32□□□□□ -1.88
YBX1P67809 AC027176.1-201ENST00000560204 514 ntBASIC3.32□□□□□ -1.88
YBX1P67809 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.32□□□□□ -1.88
YBX1P67809 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
YBX1P67809 AL513302.2-201ENST00000562313 1842 ntBASIC3.32□□□□□ -1.88
YBX1P67809 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
YBX1P67809 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
YBX1P67809 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.32□□□□□ -1.88
YBX1P67809 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.32□□□□□ -1.88
YBX1P67809 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
YBX1P67809 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
YBX1P67809 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.31□□□□□ -1.88
YBX1P67809 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
YBX1P67809 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
YBX1P67809 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.31□□□□□ -1.88
YBX1P67809 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
YBX1P67809 Y_RNA.24-201ENST00000362508 103 ntBASIC3.31□□□□□ -1.88
YBX1P67809 Y_RNA.71-201ENST00000362892 104 ntBASIC3.31□□□□□ -1.88
YBX1P67809 RNU6-529P-201ENST00000363383 104 ntBASIC3.31□□□□□ -1.88
YBX1P67809 Y_RNA.127-201ENST00000363386 109 ntBASIC3.31□□□□□ -1.88
YBX1P67809 RNU6-899P-201ENST00000363947 107 ntBASIC3.31□□□□□ -1.88
YBX1P67809 RNU6-215P-201ENST00000365169 102 ntBASIC3.31□□□□□ -1.88
YBX1P67809 RNU6-19P-201ENST00000384718 107 ntBASIC3.31□□□□□ -1.88
YBX1P67809 RNU6-376P-201ENST00000384731 106 ntBASIC3.31□□□□□ -1.88
YBX1P67809 RNU6-1077P-201ENST00000410506 102 ntBASIC3.31□□□□□ -1.88
YBX1P67809 CYCSP48-201ENST00000417124 323 ntBASIC3.31□□□□□ -1.88
YBX1P67809 AL357552.1-201ENST00000445254 415 ntBASIC3.31□□□□□ -1.88
YBX1P67809 AC146507.2-201ENST00000460608 476 ntBASIC3.31□□□□□ -1.88
YBX1P67809 SNORA31.1-201ENST00000515993 133 ntBASIC3.31□□□□□ -1.88
YBX1P67809 SNORA31.5-201ENST00000516190 133 ntBASIC3.31□□□□□ -1.88
YBX1P67809 RNU1-117P-201ENST00000517041 158 ntBASIC3.31□□□□□ -1.88
YBX1P67809 SNORD11B-201ENST00000607707 90 ntBASIC3.31□□□□□ -1.88
YBX1P67809 PCGEM1.1-201ENST00000613431 131 ntBASIC3.31□□□□□ -1.88
YBX1P67809 MIR3651-201ENST00000630427 90 ntBASIC3.31□□□□□ -1.88
YBX1P67809 MIR3658-201ENST00000636291 56 ntBASIC3.31□□□□□ -1.88
YBX1P67809 AC068700.1-201ENST00000565862 3754 ntBASIC3.31□□□□□ -1.88
YBX1P67809 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
YBX1P67809 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.31□□□□□ -1.88
YBX1P67809 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.31□□□□□ -1.88
YBX1P67809 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
YBX1P67809 AL035425.3-201ENST00000564206 4996 ntBASIC3.3□□□□□ -1.88
YBX1P67809 SNORD115-30-201ENST00000364117 82 ntBASIC3.3□□□□□ -1.88
YBX1P67809 Y_RNA.572-201ENST00000384757 98 ntBASIC3.3□□□□□ -1.88
YBX1P67809 AC004386.2-201ENST00000441858 148 ntBASIC3.3□□□□□ -1.88
YBX1P67809 AC074290.1-201ENST00000448883 135 ntBASIC3.3□□□□□ -1.88
YBX1P67809 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.3□□□□□ -1.88
YBX1P67809 RNU6-1007P-201ENST00000516586 107 ntBASIC3.3□□□□□ -1.88
YBX1P67809 RN7SKP57-201ENST00000517248 293 ntBASIC3.3□□□□□ -1.88
YBX1P67809 MIR5006-201ENST00000583027 110 ntBASIC3.3□□□□□ -1.88
YBX1P67809 Y_RNA.802-201ENST00000614892 130 ntBASIC3.3□□□□□ -1.88
YBX1P67809 AC005562.2-201ENST00000618264 111 ntBASIC3.3□□□□□ -1.88
YBX1P67809 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
YBX1P67809 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
YBX1P67809 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
YBX1P67809 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.29□□□□□ -1.88
YBX1P67809 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
YBX1P67809 Y_RNA.218-201ENST00000364218 104 ntBASIC3.29□□□□□ -1.88
YBX1P67809 Y_RNA.337-201ENST00000365312 102 ntBASIC3.29□□□□□ -1.88
YBX1P67809 RNU6-44P-201ENST00000384045 107 ntBASIC3.29□□□□□ -1.88
YBX1P67809 SNORA72.4-201ENST00000384174 132 ntBASIC3.29□□□□□ -1.88
YBX1P67809 SNORD37.2-201ENST00000391075 66 ntBASIC3.29□□□□□ -1.88
YBX1P67809 RNU6-855P-201ENST00000410395 104 ntBASIC3.29□□□□□ -1.88
YBX1P67809 RNU6-710P-201ENST00000410424 105 ntBASIC3.29□□□□□ -1.88
YBX1P67809 AC004866.1-201ENST00000411748 78 ntBASIC3.29□□□□□ -1.88
YBX1P67809 AC006461.1-201ENST00000412637 326 ntBASIC3.29□□□□□ -1.88
YBX1P67809 AL035461.1-201ENST00000421490 332 ntBASIC3.29□□□□□ -1.88
YBX1P67809 PTGES3P4-201ENST00000426243 356 ntBASIC3.29□□□□□ -1.88
YBX1P67809 snoU13.28-201ENST00000459235 104 ntBASIC3.29□□□□□ -1.88
YBX1P67809 RN7SL601P-201ENST00000471221 293 ntBASIC3.29□□□□□ -1.88
YBX1P67809 AL049873.1-201ENST00000480540 376 ntBASIC3.29□□□□□ -1.88
YBX1P67809 RPL23AP70-201ENST00000483361 460 ntBASIC3.29□□□□□ -1.88
YBX1P67809 RNU6-1234P-201ENST00000516877 103 ntBASIC3.29□□□□□ -1.88
YBX1P67809 AC104027.1-201ENST00000521887 300 ntBASIC3.29□□□□□ -1.88
YBX1P67809 AC109810.1-201ENST00000534066 224 ntBASIC3.29□□□□□ -1.88
YBX1P67809 EIF4A1P12-201ENST00000551910 141 ntBASIC3.29□□□□□ -1.88
YBX1P67809 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.29□□□□□ -1.88
YBX1P67809 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.29□□□□□ -1.88
YBX1P67809 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.29□□□□□ -1.88
YBX1P67809 TCL6_2.1-201ENST00000615162 119 ntBASIC3.29□□□□□ -1.88
YBX1P67809 AC008873.1-201ENST00000625051 138 ntBASIC3.29□□□□□ -1.88
YBX1P67809 AC068205.3-201ENST00000636385 468 ntBASIC3.29□□□□□ -1.88
YBX1P67809 AL049781.1-201ENST00000623195 3585 ntBASIC3.29□□□□□ -1.88
YBX1P67809 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
YBX1P67809 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
YBX1P67809 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.29□□□□□ -1.88
YBX1P67809 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
YBX1P67809 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
YBX1P67809 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
YBX1P67809 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
YBX1P67809 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
YBX1P67809 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
YBX1P67809 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.28□□□□□ -1.88
YBX1P67809 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
YBX1P67809 RNA5SP50-201ENST00000363731 107 ntBASIC3.28□□□□□ -1.88
YBX1P67809 RNA5SP267-201ENST00000364893 126 ntBASIC3.28□□□□□ -1.88
YBX1P67809 MIR539-201ENST00000365690 78 ntBASIC3.28□□□□□ -1.88
YBX1P67809 SNORA18.2-201ENST00000383865 132 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms