Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AL049781.1-201ENST00000623195 3585 ntBASIC4.3□□□□□ -1.72
USP46P62068 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP46P62068 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP46P62068 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
USP46P62068 RNA5SP388-201ENST00000362584 119 ntBASIC4.3□□□□□ -1.72
USP46P62068 RNU6-944P-201ENST00000364023 107 ntBASIC4.3□□□□□ -1.72
USP46P62068 RPL30P4-201ENST00000429309 333 ntBASIC4.3□□□□□ -1.72
USP46P62068 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.3□□□□□ -1.72
USP46P62068 AC245102.2-201ENST00000448956 180 ntBASIC4.3□□□□□ -1.72
USP46P62068 OR9P1P-201ENST00000496431 281 ntBASIC4.3□□□□□ -1.72
USP46P62068 RNU6-412P-201ENST00000516434 106 ntBASIC4.3□□□□□ -1.72
USP46P62068 AL360157.1-201ENST00000565962 87 ntBASIC4.3□□□□□ -1.72
USP46P62068 MIR3117-201ENST00000584034 78 ntBASIC4.3□□□□□ -1.72
USP46P62068 MIR5684-201ENST00000585074 65 ntBASIC4.3□□□□□ -1.72
USP46P62068 AC006111.3-201ENST00000622137 383 ntBASIC4.3□□□□□ -1.72
USP46P62068 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP46P62068 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
USP46P62068 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP46P62068 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.3□□□□□ -1.72
USP46P62068 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP46P62068 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP46P62068 Y_RNA.796-201ENST00000364268 102 ntBASIC4.29□□□□□ -1.72
USP46P62068 Y_RNA.799-201ENST00000364992 102 ntBASIC4.29□□□□□ -1.72
USP46P62068 RNU6-1240P-201ENST00000365155 104 ntBASIC4.29□□□□□ -1.72
USP46P62068 RNU6-438P-201ENST00000365561 103 ntBASIC4.29□□□□□ -1.72
USP46P62068 RNU6-1274P-201ENST00000384557 107 ntBASIC4.29□□□□□ -1.72
USP46P62068 MIR624-201ENST00000385217 97 ntBASIC4.29□□□□□ -1.72
USP46P62068 MIR134-201ENST00000385258 73 ntBASIC4.29□□□□□ -1.72
USP46P62068 MIR891A-201ENST00000401237 79 ntBASIC4.29□□□□□ -1.72
USP46P62068 MIR1183-201ENST00000408856 89 ntBASIC4.29□□□□□ -1.72
USP46P62068 NDUFB1P1-201ENST00000435191 180 ntBASIC4.29□□□□□ -1.72
USP46P62068 AL021397.1-201ENST00000451806 248 ntBASIC4.29□□□□□ -1.72
USP46P62068 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.29□□□□□ -1.72
USP46P62068 AC011604.1-201ENST00000545978 196 ntBASIC4.29□□□□□ -1.72
USP46P62068 JPX_2.1-201ENST00000614161 69 ntBASIC4.29□□□□□ -1.72
USP46P62068 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.29□□□□□ -1.72
USP46P62068 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP46P62068 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP46P62068 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP46P62068 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP46P62068 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP46P62068 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.28□□□□□ -1.72
USP46P62068 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP46P62068 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
USP46P62068 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
USP46P62068 Y_RNA.486-201ENST00000384398 107 ntBASIC4.28□□□□□ -1.72
USP46P62068 RNU6-106P-201ENST00000384405 107 ntBASIC4.28□□□□□ -1.72
USP46P62068 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
USP46P62068 RNA5SP306-201ENST00000411087 107 ntBASIC4.28□□□□□ -1.72
USP46P62068 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.28□□□□□ -1.72
USP46P62068 AF228730.3-201ENST00000436691 102 ntBASIC4.28□□□□□ -1.72
USP46P62068 AL031183.1-201ENST00000457667 207 ntBASIC4.28□□□□□ -1.72
USP46P62068 PPIAP15-201ENST00000479662 484 ntBASIC4.28□□□□□ -1.72
USP46P62068 RPS29P21-201ENST00000496272 170 ntBASIC4.28□□□□□ -1.72
USP46P62068 RNU6-365P-201ENST00000517113 106 ntBASIC4.28□□□□□ -1.72
USP46P62068 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.28□□□□□ -1.72
USP46P62068 MIR4662B-201ENST00000579498 81 ntBASIC4.28□□□□□ -1.72
USP46P62068 MIR4438-201ENST00000585271 93 ntBASIC4.28□□□□□ -1.72
USP46P62068 MIR6868-201ENST00000611215 58 ntBASIC4.28□□□□□ -1.72
USP46P62068 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.28□□□□□ -1.72
USP46P62068 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.28□□□□□ -1.72
USP46P62068 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP46P62068 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.28□□□□□ -1.72
USP46P62068 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.28□□□□□ -1.72
USP46P62068 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.28□□□□□ -1.72
USP46P62068 ZNF962P-201ENST00000443465 3140 ntBASIC4.28□□□□□ -1.72
USP46P62068 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
USP46P62068 RNU6-1235P-201ENST00000384559 107 ntBASIC4.27□□□□□ -1.73
USP46P62068 RNU6-554P-201ENST00000410466 106 ntBASIC4.27□□□□□ -1.73
USP46P62068 AC016909.1-201ENST00000415916 166 ntBASIC4.27□□□□□ -1.73
USP46P62068 RPS29P7-201ENST00000439662 171 ntBASIC4.27□□□□□ -1.73
USP46P62068 RNU6-498P-201ENST00000459468 107 ntBASIC4.27□□□□□ -1.73
USP46P62068 AC006445.1-201ENST00000491925 405 ntBASIC4.27□□□□□ -1.73
USP46P62068 MRPS36P2-201ENST00000512569 299 ntBASIC4.27□□□□□ -1.73
USP46P62068 RNA5SP112-201ENST00000515937 99 ntBASIC4.27□□□□□ -1.73
USP46P62068 RNU6-126P-201ENST00000516685 103 ntBASIC4.27□□□□□ -1.73
USP46P62068 RNU7-143P-201ENST00000516781 65 ntBASIC4.27□□□□□ -1.73
USP46P62068 AC007751.1-201ENST00000529260 376 ntBASIC4.27□□□□□ -1.73
USP46P62068 MIR3129-201ENST00000581095 76 ntBASIC4.27□□□□□ -1.73
USP46P62068 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP46P62068 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.27□□□□□ -1.73
USP46P62068 MIR432-201ENST00000606207 94 ntBASIC4.27□□□□□ -1.73
USP46P62068 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.27□□□□□ -1.73
USP46P62068 AC039056.2-201ENST00000622261 511 ntBASIC4.27□□□□□ -1.73
USP46P62068 Z82217.1-201ENST00000625157 8149 ntBASIC4.27□□□□□ -1.73
USP46P62068 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP46P62068 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP46P62068 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.26□□□□□ -1.73
USP46P62068 RNU1-22P-201ENST00000363334 158 ntBASIC4.26□□□□□ -1.73
USP46P62068 RNA5SP125-201ENST00000364843 120 ntBASIC4.26□□□□□ -1.73
USP46P62068 Y_RNA.528-201ENST00000384575 108 ntBASIC4.26□□□□□ -1.73
USP46P62068 MIR562-201ENST00000384894 95 ntBASIC4.26□□□□□ -1.73
USP46P62068 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.26□□□□□ -1.73
USP46P62068 RNU7-172P-201ENST00000517125 64 ntBASIC4.26□□□□□ -1.73
USP46P62068 IGKV1-22-201ENST00000524313 326 ntBASIC4.26□□□□□ -1.73
USP46P62068 MIR4286-201ENST00000580651 93 ntBASIC4.26□□□□□ -1.73
USP46P62068 AL591926.4-201ENST00000616895 298 ntBASIC4.26□□□□□ -1.73
USP46P62068 MIR6500-201ENST00000622700 86 ntBASIC4.26□□□□□ -1.73
USP46P62068 AC002064.3-201ENST00000623448 346 ntBASIC4.26□□□□□ -1.73
USP46P62068 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms