Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.04□□□□□ -2.08
LMO4P61968 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.04□□□□□ -2.08
LMO4P61968 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LMO4P61968 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LMO4P61968 RNU6-1301P-201ENST00000362724 104 ntBASIC2.03□□□□□ -2.08
LMO4P61968 Y_RNA.143-201ENST00000363520 106 ntBASIC2.03□□□□□ -2.08
LMO4P61968 SNORD115-32-201ENST00000364079 82 ntBASIC2.03□□□□□ -2.08
LMO4P61968 Y_RNA.237-201ENST00000364439 102 ntBASIC2.03□□□□□ -2.08
LMO4P61968 U8.9-201ENST00000365667 134 ntBASIC2.03□□□□□ -2.08
LMO4P61968 MIR32-201ENST00000384965 70 ntBASIC2.03□□□□□ -2.08
LMO4P61968 AL079342.1-201ENST00000401460 267 ntBASIC2.03□□□□□ -2.08
LMO4P61968 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LMO4P61968 RNU6-1245P-201ENST00000411130 106 ntBASIC2.03□□□□□ -2.08
LMO4P61968 EIF1AXP1-201ENST00000419267 435 ntBASIC2.03□□□□□ -2.08
LMO4P61968 RPL23AP95-201ENST00000426806 265 ntBASIC2.03□□□□□ -2.08
LMO4P61968 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.03□□□□□ -2.08
LMO4P61968 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.03□□□□□ -2.08
LMO4P61968 RN7SL297P-201ENST00000483161 293 ntBASIC2.03□□□□□ -2.08
LMO4P61968 HMGB1P35-201ENST00000503360 598 ntBASIC2.03□□□□□ -2.08
LMO4P61968 AIG1P1-201ENST00000503376 148 ntBASIC2.03□□□□□ -2.08
LMO4P61968 HMGB3P17-201ENST00000504195 649 ntBASIC2.03□□□□□ -2.08
LMO4P61968 AC234781.5-201ENST00000508429 271 ntBASIC2.03□□□□□ -2.08
LMO4P61968 RNU6-1012P-201ENST00000516606 109 ntBASIC2.03□□□□□ -2.08
LMO4P61968 RNU6-111P-201ENST00000517179 105 ntBASIC2.03□□□□□ -2.08
LMO4P61968 MIR2355-201ENST00000517199 87 ntBASIC2.03□□□□□ -2.08
LMO4P61968 AC023824.2-201ENST00000566185 400 ntBASIC2.03□□□□□ -2.08
LMO4P61968 AC010900.2-201ENST00000604508 210 ntBASIC2.03□□□□□ -2.08
LMO4P61968 AC069294.1-201ENST00000608397 350 ntBASIC2.03□□□□□ -2.08
LMO4P61968 AC240442.1-201ENST00000616055 283 ntBASIC2.03□□□□□ -2.08
LMO4P61968 AC024581.2-201ENST00000619986 252 ntBASIC2.03□□□□□ -2.08
LMO4P61968 ZNF658B-202ENST00000615961 3375 ntBASIC2.03□□□□□ -2.08
LMO4P61968 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LMO4P61968 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LMO4P61968 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LMO4P61968 RNU5B-2P-201ENST00000363036 113 ntBASIC2.02□□□□□ -2.09
LMO4P61968 Y_RNA.416-201ENST00000384014 113 ntBASIC2.02□□□□□ -2.09
LMO4P61968 SNORA29-201ENST00000384183 140 ntBASIC2.02□□□□□ -2.09
LMO4P61968 RNU6-318P-201ENST00000384283 103 ntBASIC2.02□□□□□ -2.09
LMO4P61968 Y_RNA.478-201ENST00000384358 107 ntBASIC2.02□□□□□ -2.09
LMO4P61968 MIR592-201ENST00000384959 97 ntBASIC2.02□□□□□ -2.09
LMO4P61968 RNU6-220P-201ENST00000390919 107 ntBASIC2.02□□□□□ -2.09
LMO4P61968 SNORD78.2-201ENST00000391076 69 ntBASIC2.02□□□□□ -2.09
LMO4P61968 MRPL35P1-201ENST00000404272 572 ntBASIC2.02□□□□□ -2.09
LMO4P61968 MIR548I3-201ENST00000408378 149 ntBASIC2.02□□□□□ -2.09
LMO4P61968 MIR1261-201ENST00000408659 82 ntBASIC2.02□□□□□ -2.09
LMO4P61968 MIR548I1-201ENST00000408810 149 ntBASIC2.02□□□□□ -2.09
LMO4P61968 RNU2-20P-201ENST00000410425 191 ntBASIC2.02□□□□□ -2.09
LMO4P61968 RNU2-64P-201ENST00000411315 191 ntBASIC2.02□□□□□ -2.09
LMO4P61968 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.02□□□□□ -2.09
LMO4P61968 AC074117.2-201ENST00000417130 397 ntBASIC2.02□□□□□ -2.09
LMO4P61968 Z98742.3-201ENST00000418637 326 ntBASIC2.02□□□□□ -2.09
LMO4P61968 AC096920.1-201ENST00000423991 241 ntBASIC2.02□□□□□ -2.09
LMO4P61968 AC004383.1-201ENST00000438135 289 ntBASIC2.02□□□□□ -2.09
LMO4P61968 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.02□□□□□ -2.09
LMO4P61968 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.02□□□□□ -2.09
LMO4P61968 RNU7-26P-201ENST00000458980 63 ntBASIC2.02□□□□□ -2.09
LMO4P61968 AC087477.1-201ENST00000465747 340 ntBASIC2.02□□□□□ -2.09
LMO4P61968 AP000870.1-201ENST00000472927 406 ntBASIC2.02□□□□□ -2.09
LMO4P61968 MED28P2-201ENST00000475771 317 ntBASIC2.02□□□□□ -2.09
LMO4P61968 RPL36AP48-201ENST00000485521 314 ntBASIC2.02□□□□□ -2.09
LMO4P61968 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.02□□□□□ -2.09
LMO4P61968 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.02□□□□□ -2.09
LMO4P61968 SNORA31.23-201ENST00000517219 133 ntBASIC2.02□□□□□ -2.09
LMO4P61968 DEFB108E-201ENST00000524692 240 ntBASIC2.02□□□□□ -2.09
LMO4P61968 AC007536.1-201ENST00000533382 349 ntBASIC2.02□□□□□ -2.09
LMO4P61968 CR383656.8-201ENST00000549046 145 ntBASIC2.02□□□□□ -2.09
LMO4P61968 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.02□□□□□ -2.09
LMO4P61968 AC105245.1-201ENST00000581934 244 ntBASIC2.02□□□□□ -2.09
LMO4P61968 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.02□□□□□ -2.09
LMO4P61968 RMST_6.1-201ENST00000611980 203 ntBASIC2.02□□□□□ -2.09
LMO4P61968 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.02□□□□□ -2.09
LMO4P61968 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LMO4P61968 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
LMO4P61968 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.02□□□□□ -2.09
LMO4P61968 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LMO4P61968 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.01□□□□□ -2.09
LMO4P61968 LINC02555-201ENST00000563933 1951 ntBASIC2.01□□□□□ -2.09
LMO4P61968 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
LMO4P61968 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.01□□□□□ -2.09
LMO4P61968 AC016717.2-201ENST00000609089 5141 ntBASIC2.01□□□□□ -2.09
LMO4P61968 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
LMO4P61968 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
LMO4P61968 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.01□□□□□ -2.09
LMO4P61968 MIR335-201ENST00000362173 94 ntBASIC2.01□□□□□ -2.09
LMO4P61968 Y_RNA.16-201ENST00000362421 102 ntBASIC2.01□□□□□ -2.09
LMO4P61968 Y_RNA.20-201ENST00000362479 113 ntBASIC2.01□□□□□ -2.09
LMO4P61968 RNA5SP361-201ENST00000362686 118 ntBASIC2.01□□□□□ -2.09
LMO4P61968 SNORA38-201ENST00000363946 132 ntBASIC2.01□□□□□ -2.09
LMO4P61968 SNORD27-201ENST00000363981 72 ntBASIC2.01□□□□□ -2.09
LMO4P61968 SNORA36A-201ENST00000384221 132 ntBASIC2.01□□□□□ -2.09
LMO4P61968 Y_RNA.515-201ENST00000384535 112 ntBASIC2.01□□□□□ -2.09
LMO4P61968 Y_RNA.539-201ENST00000384635 107 ntBASIC2.01□□□□□ -2.09
LMO4P61968 MIR544A-201ENST00000384855 91 ntBASIC2.01□□□□□ -2.09
LMO4P61968 MIR487A-201ENST00000385009 80 ntBASIC2.01□□□□□ -2.09
LMO4P61968 MIR153-2-201ENST00000385225 87 ntBASIC2.01□□□□□ -2.09
LMO4P61968 RNA5SP213-201ENST00000391031 106 ntBASIC2.01□□□□□ -2.09
LMO4P61968 RNU1-139P-201ENST00000391307 165 ntBASIC2.01□□□□□ -2.09
LMO4P61968 MIR548H3-201ENST00000408771 118 ntBASIC2.01□□□□□ -2.09
LMO4P61968 EIF1P2-201ENST00000428233 350 ntBASIC2.01□□□□□ -2.09
LMO4P61968 RPL30P4-201ENST00000429309 333 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms