Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MIR320B2-201ENST00000408479 138 ntBASIC2.91□□□□□ -1.94
PER3P56645 Y_RNA.597-201ENST00000410463 100 ntBASIC2.91□□□□□ -1.94
PER3P56645 RNU5A-5P-201ENST00000411054 116 ntBASIC2.91□□□□□ -1.94
PER3P56645 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.91□□□□□ -1.94
PER3P56645 RPS12P18-201ENST00000442381 270 ntBASIC2.91□□□□□ -1.94
PER3P56645 AC090515.1-201ENST00000465295 476 ntBASIC2.91□□□□□ -1.94
PER3P56645 RPL39P38-201ENST00000467018 153 ntBASIC2.91□□□□□ -1.94
PER3P56645 RPS23P5-201ENST00000495419 428 ntBASIC2.91□□□□□ -1.94
PER3P56645 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.91□□□□□ -1.94
PER3P56645 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.91□□□□□ -1.94
PER3P56645 RNU6-344P-201ENST00000516635 111 ntBASIC2.91□□□□□ -1.94
PER3P56645 RN7SKP282-201ENST00000516824 299 ntBASIC2.91□□□□□ -1.94
PER3P56645 SCARNA3-201ENST00000517097 143 ntBASIC2.91□□□□□ -1.94
PER3P56645 SCARNA20.6-201ENST00000517251 106 ntBASIC2.91□□□□□ -1.94
PER3P56645 CYCSP23-201ENST00000519781 313 ntBASIC2.91□□□□□ -1.94
PER3P56645 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.91□□□□□ -1.94
PER3P56645 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PER3P56645 MIR5006-201ENST00000583027 110 ntBASIC2.91□□□□□ -1.94
PER3P56645 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.91□□□□□ -1.94
PER3P56645 AC023043.3-201ENST00000593113 385 ntBASIC2.91□□□□□ -1.94
PER3P56645 AC010900.2-201ENST00000604508 210 ntBASIC2.91□□□□□ -1.94
PER3P56645 AC127459.3-201ENST00000624328 466 ntBASIC2.91□□□□□ -1.94
PER3P56645 AC090517.3-201ENST00000625170 141 ntBASIC2.91□□□□□ -1.94
PER3P56645 AC080128.1-201ENST00000474389 1917 ntBASIC2.91□□□□□ -1.94
PER3P56645 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PER3P56645 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PER3P56645 AL391987.6-201ENST00000305671 199 ntBASIC2.9□□□□□ -1.95
PER3P56645 Y_RNA.230-201ENST00000364348 109 ntBASIC2.9□□□□□ -1.95
PER3P56645 RNU6-1175P-201ENST00000365200 107 ntBASIC2.9□□□□□ -1.95
PER3P56645 SNORD21-201ENST00000383953 95 ntBASIC2.9□□□□□ -1.95
PER3P56645 MIR29B2-201ENST00000385055 81 ntBASIC2.9□□□□□ -1.95
PER3P56645 U6atac.2-201ENST00000408644 118 ntBASIC2.9□□□□□ -1.95
PER3P56645 RAB28P5-201ENST00000427490 651 ntBASIC2.9□□□□□ -1.95
PER3P56645 AC009237.7-201ENST00000447357 229 ntBASIC2.9□□□□□ -1.95
PER3P56645 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.9□□□□□ -1.95
PER3P56645 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.9□□□□□ -1.95
PER3P56645 RNU6-625P-201ENST00000459412 107 ntBASIC2.9□□□□□ -1.95
PER3P56645 AC117440.1-201ENST00000474107 571 ntBASIC2.9□□□□□ -1.95
PER3P56645 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.9□□□□□ -1.95
PER3P56645 RNA5SP217-201ENST00000515959 91 ntBASIC2.9□□□□□ -1.95
PER3P56645 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.9□□□□□ -1.95
PER3P56645 MIR3199-1-201ENST00000582434 88 ntBASIC2.9□□□□□ -1.95
PER3P56645 MIR4672-201ENST00000583126 81 ntBASIC2.9□□□□□ -1.95
PER3P56645 AC005357.1-201ENST00000588399 301 ntBASIC2.9□□□□□ -1.95
PER3P56645 AL670379.2-201ENST00000604983 252 ntBASIC2.9□□□□□ -1.95
PER3P56645 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.9□□□□□ -1.95
PER3P56645 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PER3P56645 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
PER3P56645 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PER3P56645 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PER3P56645 SNORD87-201ENST00000364849 89 ntBASIC2.89□□□□□ -1.95
PER3P56645 Y_RNA.489-201ENST00000384410 101 ntBASIC2.89□□□□□ -1.95
PER3P56645 MTND4LP30-201ENST00000454092 297 ntBASIC2.89□□□□□ -1.95
PER3P56645 SEPT14P8-201ENST00000508026 178 ntBASIC2.89□□□□□ -1.95
PER3P56645 MIR449C-201ENST00000516047 92 ntBASIC2.89□□□□□ -1.95
PER3P56645 RNU6-1023P-201ENST00000516137 106 ntBASIC2.89□□□□□ -1.95
PER3P56645 Y_RNA.673-201ENST00000516306 88 ntBASIC2.89□□□□□ -1.95
PER3P56645 MIR4435-1-201ENST00000582552 80 ntBASIC2.89□□□□□ -1.95
PER3P56645 AC005176.2-201ENST00000596933 147 ntBASIC2.89□□□□□ -1.95
PER3P56645 SNORD113-5-201ENST00000607261 78 ntBASIC2.89□□□□□ -1.95
PER3P56645 AC011373.1-201ENST00000607270 237 ntBASIC2.89□□□□□ -1.95
PER3P56645 MIR7157-201ENST00000635801 60 ntBASIC2.89□□□□□ -1.95
PER3P56645 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.89□□□□□ -1.95
PER3P56645 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.89□□□□□ -1.95
PER3P56645 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.89□□□□□ -1.95
PER3P56645 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
PER3P56645 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PER3P56645 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.88□□□□□ -1.95
PER3P56645 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
PER3P56645 RNU4-90P-201ENST00000362773 141 ntBASIC2.88□□□□□ -1.95
PER3P56645 Y_RNA.101-201ENST00000363154 102 ntBASIC2.88□□□□□ -1.95
PER3P56645 SNORA71.1-201ENST00000364523 117 ntBASIC2.88□□□□□ -1.95
PER3P56645 RNU6-290P-201ENST00000365212 101 ntBASIC2.88□□□□□ -1.95
PER3P56645 Y_RNA.498-201ENST00000384460 102 ntBASIC2.88□□□□□ -1.95
PER3P56645 MIR887-201ENST00000401258 79 ntBASIC2.88□□□□□ -1.95
PER3P56645 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PER3P56645 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.88□□□□□ -1.95
PER3P56645 RPL32P35-201ENST00000415214 394 ntBASIC2.88□□□□□ -1.95
PER3P56645 CST9LP2-201ENST00000437612 320 ntBASIC2.88□□□□□ -1.95
PER3P56645 RPL23AP58-201ENST00000440453 469 ntBASIC2.88□□□□□ -1.95
PER3P56645 RPL23AP3-201ENST00000453844 468 ntBASIC2.88□□□□□ -1.95
PER3P56645 HMGB3P17-201ENST00000504195 649 ntBASIC2.88□□□□□ -1.95
PER3P56645 RNU7-110P-201ENST00000516891 62 ntBASIC2.88□□□□□ -1.95
PER3P56645 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.88□□□□□ -1.95
PER3P56645 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.88□□□□□ -1.95
PER3P56645 AC105245.1-201ENST00000581934 244 ntBASIC2.88□□□□□ -1.95
PER3P56645 AC022441.3-201ENST00000605737 136 ntBASIC2.88□□□□□ -1.95
PER3P56645 SNORD11B-201ENST00000607707 90 ntBASIC2.88□□□□□ -1.95
PER3P56645 AC013412.1-201ENST00000610687 192 ntBASIC2.88□□□□□ -1.95
PER3P56645 AC078938.1-201ENST00000620993 318 ntBASIC2.88□□□□□ -1.95
PER3P56645 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
PER3P56645 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PER3P56645 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
PER3P56645 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PER3P56645 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PER3P56645 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PER3P56645 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PER3P56645 U8.9-201ENST00000365667 134 ntBASIC2.87□□□□□ -1.95
PER3P56645 Y_RNA.446-201ENST00000384178 104 ntBASIC2.87□□□□□ -1.95
PER3P56645 RNU6-1026P-201ENST00000384465 108 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms