Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC023824.2-201ENST00000566185 400 ntBASIC2.34□□□□□ -2.03
CDH12P55289 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH12P55289 MIR5006-201ENST00000583027 110 ntBASIC2.34□□□□□ -2.03
CDH12P55289 AC010205.1-201ENST00000616668 449 ntBASIC2.34□□□□□ -2.03
CDH12P55289 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.34□□□□□ -2.03
CDH12P55289 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
CDH12P55289 MTND5P35-201ENST00000557537 1720 ntBASIC2.34□□□□□ -2.04
CDH12P55289 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
CDH12P55289 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.33□□□□□ -2.04
CDH12P55289 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
CDH12P55289 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDH12P55289 Y_RNA.26-201ENST00000362539 101 ntBASIC2.33□□□□□ -2.04
CDH12P55289 RNU1-62P-201ENST00000362599 164 ntBASIC2.33□□□□□ -2.04
CDH12P55289 RNA5SP125-201ENST00000364843 120 ntBASIC2.33□□□□□ -2.04
CDH12P55289 RNU6-793P-201ENST00000384233 104 ntBASIC2.33□□□□□ -2.04
CDH12P55289 RNU6-1109P-201ENST00000391187 107 ntBASIC2.33□□□□□ -2.04
CDH12P55289 AL079342.1-201ENST00000401460 267 ntBASIC2.33□□□□□ -2.04
CDH12P55289 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH12P55289 AC003685.2-201ENST00000422795 395 ntBASIC2.33□□□□□ -2.04
CDH12P55289 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH12P55289 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH12P55289 CBX3P6-201ENST00000430257 527 ntBASIC2.33□□□□□ -2.04
CDH12P55289 EEF1B2P7-201ENST00000451177 676 ntBASIC2.33□□□□□ -2.04
CDH12P55289 RPL26P26-201ENST00000480251 434 ntBASIC2.33□□□□□ -2.04
CDH12P55289 AC096725.1-201ENST00000514266 313 ntBASIC2.33□□□□□ -2.04
CDH12P55289 Y_RNA.683-201ENST00000516508 93 ntBASIC2.33□□□□□ -2.04
CDH12P55289 RNU6-635P-201ENST00000516651 102 ntBASIC2.33□□□□□ -2.04
CDH12P55289 RPPH1-2P-201ENST00000516688 293 ntBASIC2.33□□□□□ -2.04
CDH12P55289 RNU6-1098P-201ENST00000516772 96 ntBASIC2.33□□□□□ -2.04
CDH12P55289 AC018630.3-201ENST00000542637 96 ntBASIC2.33□□□□□ -2.04
CDH12P55289 RRN3P3-201ENST00000549207 578 ntBASIC2.33□□□□□ -2.04
CDH12P55289 MIR3616-201ENST00000584070 92 ntBASIC2.33□□□□□ -2.04
CDH12P55289 ELOCP29-201ENST00000588193 334 ntBASIC2.33□□□□□ -2.04
CDH12P55289 RPL12P50-201ENST00000603116 116 ntBASIC2.33□□□□□ -2.04
CDH12P55289 AL137847.3-201ENST00000611521 109 ntBASIC2.33□□□□□ -2.04
CDH12P55289 FO624990.1-201ENST00000636373 85 ntBASIC2.33□□□□□ -2.04
CDH12P55289 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDH12P55289 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDH12P55289 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.32□□□□□ -2.04
CDH12P55289 Y_RNA.105-201ENST00000363182 111 ntBASIC2.32□□□□□ -2.04
CDH12P55289 RNU6-806P-201ENST00000365147 105 ntBASIC2.32□□□□□ -2.04
CDH12P55289 SNORA9-201ENST00000384215 133 ntBASIC2.32□□□□□ -2.04
CDH12P55289 RNU6-611P-201ENST00000384276 104 ntBASIC2.32□□□□□ -2.04
CDH12P55289 Y_RNA.512-201ENST00000384518 102 ntBASIC2.32□□□□□ -2.04
CDH12P55289 MIR320B2-201ENST00000408479 138 ntBASIC2.32□□□□□ -2.04
CDH12P55289 MIR1294-201ENST00000408503 142 ntBASIC2.32□□□□□ -2.04
CDH12P55289 RNA5SP504-201ENST00000410676 117 ntBASIC2.32□□□□□ -2.04
CDH12P55289 AC092427.1-202ENST00000430569 476 ntBASIC2.32□□□□□ -2.04
CDH12P55289 IFNA11P-201ENST00000446352 526 ntBASIC2.32□□□□□ -2.04
CDH12P55289 AC009237.7-201ENST00000447357 229 ntBASIC2.32□□□□□ -2.04
CDH12P55289 AC007395.1-201ENST00000451333 677 ntBASIC2.32□□□□□ -2.04
CDH12P55289 SNORD109B-201ENST00000458961 67 ntBASIC2.32□□□□□ -2.04
CDH12P55289 SNORD109A-201ENST00000459128 67 ntBASIC2.32□□□□□ -2.04
CDH12P55289 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.32□□□□□ -2.04
CDH12P55289 SNORA40.9-201ENST00000515895 93 ntBASIC2.32□□□□□ -2.04
CDH12P55289 RNU6-965P-201ENST00000516721 96 ntBASIC2.32□□□□□ -2.04
CDH12P55289 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.32□□□□□ -2.04
CDH12P55289 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.32□□□□□ -2.04
CDH12P55289 PRR13P7-201ENST00000605538 430 ntBASIC2.32□□□□□ -2.04
CDH12P55289 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.32□□□□□ -2.04
CDH12P55289 AC008121.3-201ENST00000618726 433 ntBASIC2.32□□□□□ -2.04
CDH12P55289 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CDH12P55289 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDH12P55289 Y_RNA.47-201ENST00000362697 108 ntBASIC2.31□□□□□ -2.04
CDH12P55289 RNU6-859P-201ENST00000362728 107 ntBASIC2.31□□□□□ -2.04
CDH12P55289 RNU6-238P-201ENST00000363313 106 ntBASIC2.31□□□□□ -2.04
CDH12P55289 Y_RNA.152-201ENST00000363578 100 ntBASIC2.31□□□□□ -2.04
CDH12P55289 RNU5F-3P-201ENST00000363767 117 ntBASIC2.31□□□□□ -2.04
CDH12P55289 RNU6-961P-201ENST00000363893 105 ntBASIC2.31□□□□□ -2.04
CDH12P55289 Y_RNA.276-201ENST00000364732 109 ntBASIC2.31□□□□□ -2.04
CDH12P55289 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH12P55289 Y_RNA.415-201ENST00000384012 112 ntBASIC2.31□□□□□ -2.04
CDH12P55289 Y_RNA.574-201ENST00000384766 95 ntBASIC2.31□□□□□ -2.04
CDH12P55289 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CDH12P55289 AL033519.2-201ENST00000403958 392 ntBASIC2.31□□□□□ -2.04
CDH12P55289 MRPL35P1-201ENST00000404272 572 ntBASIC2.31□□□□□ -2.04
CDH12P55289 Y_RNA.595-201ENST00000410403 105 ntBASIC2.31□□□□□ -2.04
CDH12P55289 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.31□□□□□ -2.04
CDH12P55289 MTCYBP9-201ENST00000431021 303 ntBASIC2.31□□□□□ -2.04
CDH12P55289 PCNPP5-201ENST00000452246 481 ntBASIC2.31□□□□□ -2.04
CDH12P55289 CYP2C59P-201ENST00000457790 269 ntBASIC2.31□□□□□ -2.04
CDH12P55289 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH12P55289 MTCO2P24-201ENST00000515611 426 ntBASIC2.31□□□□□ -2.04
CDH12P55289 RNU6-344P-201ENST00000516635 111 ntBASIC2.31□□□□□ -2.04
CDH12P55289 SNORA48.11-201ENST00000517015 89 ntBASIC2.31□□□□□ -2.04
CDH12P55289 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.31□□□□□ -2.04
CDH12P55289 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH12P55289 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH12P55289 MIR3200-201ENST00000580767 85 ntBASIC2.31□□□□□ -2.04
CDH12P55289 AL161756.2-201ENST00000604597 246 ntBASIC2.31□□□□□ -2.04
CDH12P55289 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDH12P55289 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.31□□□□□ -2.04
CDH12P55289 ZNF271P-202ENST00000465539 1970 ntBASIC2.3□□□□□ -2.04
CDH12P55289 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH12P55289 Y_RNA.144-201ENST00000363521 113 ntBASIC2.3□□□□□ -2.04
CDH12P55289 RNU6-770P-201ENST00000363929 105 ntBASIC2.3□□□□□ -2.04
CDH12P55289 SNORD87-201ENST00000364849 89 ntBASIC2.3□□□□□ -2.04
CDH12P55289 RNU6-234P-201ENST00000365229 104 ntBASIC2.3□□□□□ -2.04
CDH12P55289 Y_RNA.439-201ENST00000384119 94 ntBASIC2.3□□□□□ -2.04
CDH12P55289 SNORA67.2-201ENST00000384300 149 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms