Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.06□□□□□ -2.08
CDH11P55287 MIR6766-201ENST00000622641 72 ntBASIC2.06□□□□□ -2.08
CDH11P55287 AC022140.2-201ENST00000623500 188 ntBASIC2.06□□□□□ -2.08
CDH11P55287 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDH11P55287 Y_RNA.31-201ENST00000362574 102 ntBASIC2.05□□□□□ -2.08
CDH11P55287 RNU6-234P-201ENST00000365229 104 ntBASIC2.05□□□□□ -2.08
CDH11P55287 RNU6-281P-201ENST00000384212 103 ntBASIC2.05□□□□□ -2.08
CDH11P55287 RNU1-148P-201ENST00000384472 162 ntBASIC2.05□□□□□ -2.08
CDH11P55287 Y_RNA.557-201ENST00000384680 107 ntBASIC2.05□□□□□ -2.08
CDH11P55287 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.05□□□□□ -2.08
CDH11P55287 RNA5SP425-201ENST00000410336 112 ntBASIC2.05□□□□□ -2.08
CDH11P55287 Z98742.3-201ENST00000418637 326 ntBASIC2.05□□□□□ -2.08
CDH11P55287 PMCHL1-202ENST00000423102 261 ntBASIC2.05□□□□□ -2.08
CDH11P55287 AC092423.1-201ENST00000430165 186 ntBASIC2.05□□□□□ -2.08
CDH11P55287 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.05□□□□□ -2.08
CDH11P55287 AC096638.1-201ENST00000444678 216 ntBASIC2.05□□□□□ -2.08
CDH11P55287 AC007677.1-201ENST00000445757 515 ntBASIC2.05□□□□□ -2.08
CDH11P55287 MTCO3P8-201ENST00000453691 755 ntBASIC2.05□□□□□ -2.08
CDH11P55287 AC132942.1-201ENST00000486753 483 ntBASIC2.05□□□□□ -2.08
CDH11P55287 CKS1BP2-201ENST00000497342 240 ntBASIC2.05□□□□□ -2.08
CDH11P55287 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH11P55287 RNA5SP281-201ENST00000516504 135 ntBASIC2.05□□□□□ -2.08
CDH11P55287 RNU6-965P-201ENST00000516721 96 ntBASIC2.05□□□□□ -2.08
CDH11P55287 RNU6-1098P-201ENST00000516772 96 ntBASIC2.05□□□□□ -2.08
CDH11P55287 RNU6-1198P-201ENST00000516904 67 ntBASIC2.05□□□□□ -2.08
CDH11P55287 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH11P55287 SNRPGP18-201ENST00000553000 214 ntBASIC2.05□□□□□ -2.08
CDH11P55287 AC026470.2-201ENST00000561492 181 ntBASIC2.05□□□□□ -2.08
CDH11P55287 UBL5P4-201ENST00000562584 236 ntBASIC2.05□□□□□ -2.08
CDH11P55287 AC090517.1-201ENST00000569307 266 ntBASIC2.05□□□□□ -2.08
CDH11P55287 AC090617.3-201ENST00000573670 475 ntBASIC2.05□□□□□ -2.08
CDH11P55287 RPL17P51-201ENST00000605218 238 ntBASIC2.05□□□□□ -2.08
CDH11P55287 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH11P55287 AC046143.2-201ENST00000609789 160 ntBASIC2.05□□□□□ -2.08
CDH11P55287 AC245884.12-201ENST00000615364 59 ntBASIC2.05□□□□□ -2.08
CDH11P55287 AC090971.5-201ENST00000621102 293 ntBASIC2.05□□□□□ -2.08
CDH11P55287 MIR203B-201ENST00000636080 86 ntBASIC2.05□□□□□ -2.08
CDH11P55287 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CDH11P55287 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CDH11P55287 MTND5P16-201ENST00000460269 1703 ntBASIC2.05□□□□□ -2.08
CDH11P55287 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.05□□□□□ -2.08
CDH11P55287 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDH11P55287 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CDH11P55287 ZNF204P-201ENST00000416749 2397 ntBASIC2.05□□□□□ -2.08
CDH11P55287 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CDH11P55287 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.04□□□□□ -2.08
CDH11P55287 RNU1-115P-201ENST00000365329 160 ntBASIC2.04□□□□□ -2.08
CDH11P55287 SNORA18.2-201ENST00000383865 132 ntBASIC2.04□□□□□ -2.08
CDH11P55287 RNU6-245P-201ENST00000384020 107 ntBASIC2.04□□□□□ -2.08
CDH11P55287 RNU4-52P-201ENST00000384209 138 ntBASIC2.04□□□□□ -2.08
CDH11P55287 RNU6-611P-201ENST00000384276 104 ntBASIC2.04□□□□□ -2.08
CDH11P55287 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH11P55287 AC027124.2-201ENST00000428249 105 ntBASIC2.04□□□□□ -2.08
CDH11P55287 AL356320.1-201ENST00000429616 163 ntBASIC2.04□□□□□ -2.08
CDH11P55287 WARS2P1-201ENST00000429678 537 ntBASIC2.04□□□□□ -2.08
CDH11P55287 AC099799.1-201ENST00000439809 192 ntBASIC2.04□□□□□ -2.08
CDH11P55287 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
CDH11P55287 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.04□□□□□ -2.08
CDH11P55287 AC107032.1-201ENST00000485945 480 ntBASIC2.04□□□□□ -2.08
CDH11P55287 ATP5EP1-201ENST00000510257 156 ntBASIC2.04□□□□□ -2.08
CDH11P55287 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH11P55287 RNU6-1114P-201ENST00000516022 107 ntBASIC2.04□□□□□ -2.08
CDH11P55287 AC034114.1-201ENST00000520293 285 ntBASIC2.04□□□□□ -2.08
CDH11P55287 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.04□□□□□ -2.08
CDH11P55287 CYCSP26-201ENST00000534107 320 ntBASIC2.04□□□□□ -2.08
CDH11P55287 AC020661.2-201ENST00000560114 134 ntBASIC2.04□□□□□ -2.08
CDH11P55287 AC233702.2-202ENST00000562547 291 ntBASIC2.04□□□□□ -2.08
CDH11P55287 AC009127.3-201ENST00000570531 403 ntBASIC2.04□□□□□ -2.08
CDH11P55287 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.04□□□□□ -2.08
CDH11P55287 AC125232.2-201ENST00000592457 143 ntBASIC2.04□□□□□ -2.08
CDH11P55287 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.04□□□□□ -2.08
CDH11P55287 TCL6_2.1-201ENST00000615162 119 ntBASIC2.04□□□□□ -2.08
CDH11P55287 AC005562.2-201ENST00000618264 111 ntBASIC2.04□□□□□ -2.08
CDH11P55287 MIR6873-201ENST00000622788 63 ntBASIC2.04□□□□□ -2.08
CDH11P55287 AC134503.1-201ENST00000633048 54 ntBASIC2.04□□□□□ -2.08
CDH11P55287 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CDH11P55287 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CDH11P55287 RNU6-873P-201ENST00000363833 107 ntBASIC2.03□□□□□ -2.08
CDH11P55287 SNORA38-201ENST00000363946 132 ntBASIC2.03□□□□□ -2.08
CDH11P55287 RNU4-42P-201ENST00000364738 142 ntBASIC2.03□□□□□ -2.08
CDH11P55287 Y_RNA.358-201ENST00000365491 99 ntBASIC2.03□□□□□ -2.08
CDH11P55287 SNORA67.2-201ENST00000384300 149 ntBASIC2.03□□□□□ -2.08
CDH11P55287 RNY1P14-201ENST00000384426 108 ntBASIC2.03□□□□□ -2.08
CDH11P55287 Y_RNA.592-201ENST00000410274 109 ntBASIC2.03□□□□□ -2.08
CDH11P55287 MTND1P14-201ENST00000427400 950 ntBASIC2.03□□□□□ -2.08
CDH11P55287 AC004386.2-201ENST00000441858 148 ntBASIC2.03□□□□□ -2.08
CDH11P55287 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.03□□□□□ -2.08
CDH11P55287 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.03□□□□□ -2.08
CDH11P55287 RNU4-77P-201ENST00000516692 156 ntBASIC2.03□□□□□ -2.08
CDH11P55287 RNU6-1153P-201ENST00000516760 105 ntBASIC2.03□□□□□ -2.08
CDH11P55287 RNU2-44P-201ENST00000516795 194 ntBASIC2.03□□□□□ -2.08
CDH11P55287 RNU6-667P-201ENST00000517186 102 ntBASIC2.03□□□□□ -2.08
CDH11P55287 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.03□□□□□ -2.08
CDH11P55287 MIR5007-201ENST00000583098 95 ntBASIC2.03□□□□□ -2.08
CDH11P55287 MIR6715A-201ENST00000615929 79 ntBASIC2.03□□□□□ -2.08
CDH11P55287 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDH11P55287 Y_RNA.128-201ENST00000363391 112 ntBASIC2.02□□□□□ -2.09
CDH11P55287 RNY3P11-201ENST00000364153 102 ntBASIC2.02□□□□□ -2.09
CDH11P55287 RNA5SP37-201ENST00000365420 130 ntBASIC2.02□□□□□ -2.09
CDH11P55287 SNORA6-201ENST00000384033 151 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms