Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
EPHA4P54764 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
EPHA4P54764 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
EPHA4P54764 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
EPHA4P54764 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
EPHA4P54764 Z82209.1-201ENST00000422141 2135 ntBASIC3.83□□□□□ -1.8
EPHA4P54764 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.83□□□□□ -1.8
EPHA4P54764 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
EPHA4P54764 RNA5SP399-201ENST00000364003 117 ntBASIC3.83□□□□□ -1.8
EPHA4P54764 SNORA62.3-201ENST00000365110 153 ntBASIC3.83□□□□□ -1.8
EPHA4P54764 SNORA72-201ENST00000384339 132 ntBASIC3.83□□□□□ -1.8
EPHA4P54764 MIR1278-201ENST00000408753 81 ntBASIC3.83□□□□□ -1.8
EPHA4P54764 SNORA3C-201ENST00000408792 125 ntBASIC3.83□□□□□ -1.8
EPHA4P54764 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.83□□□□□ -1.8
EPHA4P54764 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.83□□□□□ -1.8
EPHA4P54764 PDCD5P2-201ENST00000507570 312 ntBASIC3.83□□□□□ -1.8
EPHA4P54764 AC074050.1-201ENST00000563247 211 ntBASIC3.83□□□□□ -1.8
EPHA4P54764 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.83□□□□□ -1.8
EPHA4P54764 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
EPHA4P54764 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
EPHA4P54764 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
EPHA4P54764 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
EPHA4P54764 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
EPHA4P54764 MAPK10-372ENST00000641954 3413 ntBASIC3.82□□□□□ -1.8
EPHA4P54764 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.82□□□□□ -1.8
EPHA4P54764 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.82□□□□□ -1.8
EPHA4P54764 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
EPHA4P54764 RNU6-1144P-201ENST00000384247 104 ntBASIC3.82□□□□□ -1.8
EPHA4P54764 RNU6-1274P-201ENST00000384557 107 ntBASIC3.82□□□□□ -1.8
EPHA4P54764 RNU6-1235P-201ENST00000384559 107 ntBASIC3.82□□□□□ -1.8
EPHA4P54764 SNORA57.3-201ENST00000411095 141 ntBASIC3.82□□□□□ -1.8
EPHA4P54764 AC016717.1-201ENST00000448918 286 ntBASIC3.82□□□□□ -1.8
EPHA4P54764 RNU6-498P-201ENST00000459468 107 ntBASIC3.82□□□□□ -1.8
EPHA4P54764 AC008155.2-201ENST00000464337 397 ntBASIC3.82□□□□□ -1.8
EPHA4P54764 SNRPGP3-201ENST00000469405 227 ntBASIC3.82□□□□□ -1.8
EPHA4P54764 RPS27P22-201ENST00000478056 241 ntBASIC3.82□□□□□ -1.8
EPHA4P54764 RNU6-586P-201ENST00000517265 104 ntBASIC3.82□□□□□ -1.8
EPHA4P54764 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.82□□□□□ -1.8
EPHA4P54764 AC110741.2-201ENST00000605278 268 ntBASIC3.82□□□□□ -1.8
EPHA4P54764 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.82□□□□□ -1.8
EPHA4P54764 AC096577.2-201ENST00000611455 153 ntBASIC3.82□□□□□ -1.8
EPHA4P54764 U6.95-201ENST00000636931 70 ntBASIC3.82□□□□□ -1.8
EPHA4P54764 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
EPHA4P54764 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.82□□□□□ -1.8
EPHA4P54764 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.82□□□□□ -1.8
EPHA4P54764 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.82□□□□□ -1.8
EPHA4P54764 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
EPHA4P54764 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
EPHA4P54764 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.81□□□□□ -1.8
EPHA4P54764 AC058791.1-201ENST00000608412 3198 ntBASIC3.81□□□□□ -1.8
EPHA4P54764 SNORD18B-201ENST00000365659 72 ntBASIC3.81□□□□□ -1.8
EPHA4P54764 AL359837.1-201ENST00000381357 287 ntBASIC3.81□□□□□ -1.8
EPHA4P54764 SNORA26-201ENST00000391286 122 ntBASIC3.81□□□□□ -1.8
EPHA4P54764 SNORA3.3-201ENST00000408712 125 ntBASIC3.81□□□□□ -1.8
EPHA4P54764 RNU2-70P-201ENST00000410718 179 ntBASIC3.81□□□□□ -1.8
EPHA4P54764 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.81□□□□□ -1.8
EPHA4P54764 AC083863.1-201ENST00000438811 231 ntBASIC3.81□□□□□ -1.8
EPHA4P54764 RN7SL323P-201ENST00000494712 295 ntBASIC3.81□□□□□ -1.8
EPHA4P54764 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
EPHA4P54764 RNU2-34P-201ENST00000516534 121 ntBASIC3.81□□□□□ -1.8
EPHA4P54764 RNU6-63P-201ENST00000516690 95 ntBASIC3.81□□□□□ -1.8
EPHA4P54764 MTND5P34-201ENST00000568888 325 ntBASIC3.81□□□□□ -1.8
EPHA4P54764 MIR4644-201ENST00000579929 84 ntBASIC3.81□□□□□ -1.8
EPHA4P54764 MIR3158-1-201ENST00000583596 81 ntBASIC3.81□□□□□ -1.8
EPHA4P54764 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.81□□□□□ -1.8
EPHA4P54764 AL049861.1-201ENST00000603130 150 ntBASIC3.81□□□□□ -1.8
EPHA4P54764 AC013412.1-201ENST00000610687 192 ntBASIC3.81□□□□□ -1.8
EPHA4P54764 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.81□□□□□ -1.8
EPHA4P54764 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
EPHA4P54764 RNU6-1240P-201ENST00000365155 104 ntBASIC3.8□□□□□ -1.8
EPHA4P54764 MIR23B-201ENST00000384832 97 ntBASIC3.8□□□□□ -1.8
EPHA4P54764 PTMAP2-201ENST00000397627 327 ntBASIC3.8□□□□□ -1.8
EPHA4P54764 AL133547.1-201ENST00000448546 220 ntBASIC3.8□□□□□ -1.8
EPHA4P54764 AC010531.2-201ENST00000465012 153 ntBASIC3.8□□□□□ -1.8
EPHA4P54764 AC090515.1-201ENST00000465295 476 ntBASIC3.8□□□□□ -1.8
EPHA4P54764 RPS29P21-201ENST00000496272 170 ntBASIC3.8□□□□□ -1.8
EPHA4P54764 AC025554.1-201ENST00000505641 188 ntBASIC3.8□□□□□ -1.8
EPHA4P54764 MRPS36P2-201ENST00000512569 299 ntBASIC3.8□□□□□ -1.8
EPHA4P54764 RNA5SP153-201ENST00000516498 76 ntBASIC3.8□□□□□ -1.8
EPHA4P54764 SNORA67.7-201ENST00000516664 135 ntBASIC3.8□□□□□ -1.8
EPHA4P54764 RNU6-126P-201ENST00000516685 103 ntBASIC3.8□□□□□ -1.8
EPHA4P54764 AC025647.1-201ENST00000517879 253 ntBASIC3.8□□□□□ -1.8
EPHA4P54764 AL021707.8-201ENST00000609428 183 ntBASIC3.8□□□□□ -1.8
EPHA4P54764 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
EPHA4P54764 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
EPHA4P54764 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.8□□□□□ -1.8
EPHA4P54764 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.8□□□□□ -1.8
EPHA4P54764 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
EPHA4P54764 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
EPHA4P54764 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
EPHA4P54764 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
EPHA4P54764 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
EPHA4P54764 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.79□□□□□ -1.8
EPHA4P54764 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
EPHA4P54764 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
EPHA4P54764 RNU6-235P-201ENST00000362644 107 ntBASIC3.79□□□□□ -1.8
EPHA4P54764 Y_RNA.120-201ENST00000363304 110 ntBASIC3.79□□□□□ -1.8
EPHA4P54764 RN7SKP156-201ENST00000410308 342 ntBASIC3.79□□□□□ -1.8
EPHA4P54764 RNA5SP511-201ENST00000410487 115 ntBASIC3.79□□□□□ -1.8
EPHA4P54764 CYCSP49-201ENST00000420810 319 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms