Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 AL139109.1-201ENST00000455491 297 ntBASIC2.59□□□□□ -1.99
TTC3P53804 AC006026.2-201ENST00000457376 180 ntBASIC2.59□□□□□ -1.99
TTC3P53804 AC016632.1-201ENST00000503994 196 ntBASIC2.59□□□□□ -1.99
TTC3P53804 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.59□□□□□ -1.99
TTC3P53804 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.59□□□□□ -1.99
TTC3P53804 DEFB122-202ENST00000569013 197 ntBASIC2.59□□□□□ -1.99
TTC3P53804 MIR4474-201ENST00000579189 78 ntBASIC2.59□□□□□ -1.99
TTC3P53804 Z83818.1-201ENST00000603584 150 ntBASIC2.59□□□□□ -1.99
TTC3P53804 AC046143.2-201ENST00000609789 160 ntBASIC2.59□□□□□ -1.99
TTC3P53804 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.59□□□□□ -1.99
TTC3P53804 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
TTC3P53804 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
TTC3P53804 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.59□□□□□ -1.99
TTC3P53804 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.59□□□□□ -1.99
TTC3P53804 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
TTC3P53804 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TTC3P53804 AC092268.1-201ENST00000342691 405 ntBASIC2.59□□□□□ -2
TTC3P53804 RNU6-280P-201ENST00000364145 104 ntBASIC2.59□□□□□ -2
TTC3P53804 Y_RNA.416-201ENST00000384014 113 ntBASIC2.59□□□□□ -2
TTC3P53804 RNU6-748P-201ENST00000384648 107 ntBASIC2.59□□□□□ -2
TTC3P53804 RNU5A-5P-201ENST00000411054 116 ntBASIC2.59□□□□□ -2
TTC3P53804 AC018634.1-201ENST00000437554 401 ntBASIC2.59□□□□□ -2
TTC3P53804 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.59□□□□□ -2
TTC3P53804 AC010469.2-201ENST00000496412 480 ntBASIC2.59□□□□□ -2
TTC3P53804 RNU5F-8P-201ENST00000515941 111 ntBASIC2.59□□□□□ -2
TTC3P53804 SNORA31.15-201ENST00000516771 132 ntBASIC2.59□□□□□ -2
TTC3P53804 SNORA31.16-201ENST00000516773 139 ntBASIC2.59□□□□□ -2
TTC3P53804 MZT1P2-201ENST00000604387 248 ntBASIC2.59□□□□□ -2
TTC3P53804 AC107294.3-201ENST00000609211 526 ntBASIC2.59□□□□□ -2
TTC3P53804 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.59□□□□□ -2
TTC3P53804 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.59□□□□□ -2
TTC3P53804 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TTC3P53804 RNU6-142P-201ENST00000384019 107 ntBASIC2.58□□□□□ -2
TTC3P53804 Y_RNA.504-201ENST00000384481 104 ntBASIC2.58□□□□□ -2
TTC3P53804 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.58□□□□□ -2
TTC3P53804 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.58□□□□□ -2
TTC3P53804 RNU6-567P-201ENST00000516746 107 ntBASIC2.58□□□□□ -2
TTC3P53804 MIR4506-201ENST00000584693 77 ntBASIC2.58□□□□□ -2
TTC3P53804 SNORD113-5-201ENST00000607261 78 ntBASIC2.58□□□□□ -2
TTC3P53804 SNORA50A-202ENST00000629536 136 ntBASIC2.58□□□□□ -2
TTC3P53804 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.58□□□□□ -2
TTC3P53804 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.58□□□□□ -2
TTC3P53804 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TTC3P53804 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TTC3P53804 Y_RNA.54-201ENST00000362766 105 ntBASIC2.58□□□□□ -2
TTC3P53804 RNU4-56P-201ENST00000364700 142 ntBASIC2.58□□□□□ -2
TTC3P53804 RNU6-338P-201ENST00000383888 105 ntBASIC2.58□□□□□ -2
TTC3P53804 SNORA26.3-201ENST00000391119 136 ntBASIC2.58□□□□□ -2
TTC3P53804 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.58□□□□□ -2
TTC3P53804 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.58□□□□□ -2
TTC3P53804 RN7SKP40-201ENST00000517211 242 ntBASIC2.58□□□□□ -2
TTC3P53804 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.58□□□□□ -2
TTC3P53804 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.58□□□□□ -2
TTC3P53804 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.58□□□□□ -2
TTC3P53804 AC093023.1-201ENST00000547375 507 ntBASIC2.58□□□□□ -2
TTC3P53804 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.58□□□□□ -2
TTC3P53804 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.58□□□□□ -2
TTC3P53804 AC005828.6-201ENST00000606610 232 ntBASIC2.58□□□□□ -2
TTC3P53804 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
TTC3P53804 RNU6-873P-201ENST00000363833 107 ntBASIC2.57□□□□□ -2
TTC3P53804 RNU6-200P-201ENST00000364743 107 ntBASIC2.57□□□□□ -2
TTC3P53804 RNU4-9P-201ENST00000364951 139 ntBASIC2.57□□□□□ -2
TTC3P53804 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
TTC3P53804 MIR548H3-201ENST00000408771 118 ntBASIC2.57□□□□□ -2
TTC3P53804 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.57□□□□□ -2
TTC3P53804 GPM6BP3-201ENST00000442797 145 ntBASIC2.57□□□□□ -2
TTC3P53804 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.57□□□□□ -2
TTC3P53804 AC007395.1-201ENST00000451333 677 ntBASIC2.57□□□□□ -2
TTC3P53804 AC087477.1-201ENST00000465747 340 ntBASIC2.57□□□□□ -2
TTC3P53804 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.57□□□□□ -2
TTC3P53804 RNU6-496P-201ENST00000516145 99 ntBASIC2.57□□□□□ -2
TTC3P53804 RNU2-44P-201ENST00000516795 194 ntBASIC2.57□□□□□ -2
TTC3P53804 AC022441.3-201ENST00000605737 136 ntBASIC2.57□□□□□ -2
TTC3P53804 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.57□□□□□ -2
TTC3P53804 SNORD113-8-201ENST00000363497 74 ntBASIC2.56□□□□□ -2
TTC3P53804 SNORD63-201ENST00000384262 68 ntBASIC2.56□□□□□ -2
TTC3P53804 Y_RNA.562-201ENST00000384695 113 ntBASIC2.56□□□□□ -2
TTC3P53804 MIR767-201ENST00000390228 109 ntBASIC2.56□□□□□ -2
TTC3P53804 AL603910.2-201ENST00000407268 136 ntBASIC2.56□□□□□ -2
TTC3P53804 RNU4-30P-201ENST00000410245 143 ntBASIC2.56□□□□□ -2
TTC3P53804 RNU2-14P-201ENST00000411053 191 ntBASIC2.56□□□□□ -2
TTC3P53804 PIGPP3-201ENST00000425307 415 ntBASIC2.56□□□□□ -2
TTC3P53804 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.56□□□□□ -2
TTC3P53804 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.56□□□□□ -2
TTC3P53804 SNORA31.23-201ENST00000517219 133 ntBASIC2.56□□□□□ -2
TTC3P53804 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.56□□□□□ -2
TTC3P53804 MIR4659A-201ENST00000580269 81 ntBASIC2.56□□□□□ -2
TTC3P53804 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.56□□□□□ -2
TTC3P53804 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.56□□□□□ -2
TTC3P53804 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.56□□□□□ -2
TTC3P53804 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
TTC3P53804 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.56□□□□□ -2
TTC3P53804 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.56□□□□□ -2
TTC3P53804 RNU6-222P-201ENST00000362438 107 ntBASIC2.56□□□□□ -2
TTC3P53804 Y_RNA.331-201ENST00000365267 102 ntBASIC2.56□□□□□ -2
TTC3P53804 CBX3P9-201ENST00000402326 552 ntBASIC2.56□□□□□ -2
TTC3P53804 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.56□□□□□ -2
TTC3P53804 MIR1289-2-201ENST00000408360 111 ntBASIC2.56□□□□□ -2
TTC3P53804 MIR1298-201ENST00000408783 112 ntBASIC2.56□□□□□ -2
TTC3P53804 RPL30P14-201ENST00000482744 348 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms