Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 USP9YP23-201ENST00000455085 407 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.98□□□□□ -2.09
NKX2-1P43699 AP000870.1-201ENST00000472927 406 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.98□□□□□ -2.09
NKX2-1P43699 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.98□□□□□ -2.09
NKX2-1P43699 AC107222.1-201ENST00000510899 637 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 AC096725.1-201ENST00000514266 313 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 RN7SKP49-201ENST00000516675 260 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 RNU6-965P-201ENST00000516721 96 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 AC079600.2-201ENST00000550076 130 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 MIR5694-201ENST00000581190 76 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 AL031274.2-201ENST00000599419 203 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 AC092447.9-201ENST00000603395 144 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 AC005000.2-201ENST00000605468 310 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 AC083806.3-201ENST00000614016 455 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 AC010205.1-201ENST00000616668 449 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 AC005562.2-201ENST00000618264 111 ntBASIC1.98□□□□□ -2.09
NKX2-1P43699 Y_RNA.27-201ENST00000362540 103 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 Y_RNA.148-201ENST00000363557 117 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 SNORA33.2-201ENST00000365413 134 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 RNU6-541P-201ENST00000384709 110 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 MIR329-1-201ENST00000385028 80 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 MIR483-201ENST00000385070 76 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 HMGN2P39-201ENST00000398005 273 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 AC114482.1-201ENST00000418010 247 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.97□□□□□ -2.09
NKX2-1P43699 AC092423.1-201ENST00000430165 186 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 CHEK2P4-201ENST00000450340 246 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 AC107032.1-201ENST00000485945 480 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.97□□□□□ -2.09
NKX2-1P43699 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.97□□□□□ -2.09
NKX2-1P43699 AC105758.1-201ENST00000506038 399 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 AC093259.1-201ENST00000509755 300 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.97□□□□□ -2.09
NKX2-1P43699 RNU6-1153P-201ENST00000516760 105 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 Y_RNA.721-201ENST00000517207 102 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 SNORA31.25-201ENST00000517242 134 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 AC087441.2-201ENST00000529141 262 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.97□□□□□ -2.09
NKX2-1P43699 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.97□□□□□ -2.09
NKX2-1P43699 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.97□□□□□ -2.09
NKX2-1P43699 AC090517.1-201ENST00000569307 266 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 AC022432.1-201ENST00000595739 310 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 SNORD58B-201ENST00000607313 66 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 MIR1244-1-201ENST00000612829 85 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 U2.1-201ENST00000618978 145 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 MIR1244-3-201ENST00000635744 85 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 MIR1244-2-201ENST00000636449 85 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 MIR1244-4-202ENST00000636813 85 ntBASIC1.97□□□□□ -2.09
NKX2-1P43699 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NKX2-1P43699 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
NKX2-1P43699 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NKX2-1P43699 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.96□□□□□ -2.1
NKX2-1P43699 MIR410-201ENST00000362222 80 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 RNU6-1301P-201ENST00000362724 104 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 RNU6-859P-201ENST00000362728 107 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 SNORA63-201ENST00000363450 132 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 Y_RNA.314-201ENST00000365114 102 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 Y_RNA.332-201ENST00000365271 113 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 SNORA63.7-201ENST00000365579 123 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 SNORD14D-201ENST00000384390 87 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 MRPL42P3-201ENST00000401492 326 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 SNORD23.1-201ENST00000408212 104 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.96□□□□□ -2.1
NKX2-1P43699 COTL1P1-201ENST00000422309 375 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.96□□□□□ -2.1
NKX2-1P43699 AC025750.2-201ENST00000442609 450 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 TOMM22P6-201ENST00000465035 409 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 RPS23P5-201ENST00000495419 428 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 AC074133.1-201ENST00000515696 183 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 RNU2-44P-201ENST00000516795 194 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 AC022616.4-201ENST00000522985 181 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 MIR4529-201ENST00000578110 78 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 AC067747.1-201ENST00000608026 250 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 AC006386.2-201ENST00000624491 75 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 AC012005.1-201ENST00000624575 75 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 AC008873.1-201ENST00000625051 138 ntBASIC1.96□□□□□ -2.1
NKX2-1P43699 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.96□□□□□ -2.1
NKX2-1P43699 AC005592.1-201ENST00000566527 1640 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 SNORD31B-201ENST00000364977 69 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 Y_RNA.358-201ENST00000365491 99 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 MIR300-201ENST00000401138 83 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 MRPL35P1-201ENST00000404272 572 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 AL590004.1-201ENST00000405321 300 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 WARS2P1-201ENST00000429678 537 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 HMGN2P18-201ENST00000450680 270 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.95□□□□□ -2.1
NKX2-1P43699 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.95□□□□□ -2.1
NKX2-1P43699 RNU5F-4P-201ENST00000516581 114 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 RNU7-193P-201ENST00000516723 65 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 RNA5SP490-201ENST00000517141 136 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 DEFB131C-201ENST00000528817 165 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 MIR5188-201ENST00000583467 113 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 AC006157.1-201ENST00000611750 366 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.95□□□□□ -2.1
NKX2-1P43699 AC005296.1-201ENST00000616145 209 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.95□□□□□ -2.1
NKX2-1P43699 AC012640.5-201ENST00000623897 319 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms