Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RNU6-417P-201ENST00000384712 107 ntBASIC1.07□□□□□ -2.24
SLC1A1P43005 AL049545.1-201ENST00000401856 572 ntBASIC1.07□□□□□ -2.24
SLC1A1P43005 AL663109.1-201ENST00000411498 844 ntBASIC1.07□□□□□ -2.24
SLC1A1P43005 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.07□□□□□ -2.24
SLC1A1P43005 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.07□□□□□ -2.24
SLC1A1P43005 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.07□□□□□ -2.24
SLC1A1P43005 AL133373.1-201ENST00000497098 94 ntBASIC1.07□□□□□ -2.24
SLC1A1P43005 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.07□□□□□ -2.24
SLC1A1P43005 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.07□□□□□ -2.24
SLC1A1P43005 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.07□□□□□ -2.24
SLC1A1P43005 AL118558.2-201ENST00000556294 238 ntBASIC1.07□□□□□ -2.24
SLC1A1P43005 MIR4498-201ENST00000577599 66 ntBASIC1.07□□□□□ -2.24
SLC1A1P43005 AC016727.1-205ENST00000605437 569 ntBASIC1.07□□□□□ -2.24
SLC1A1P43005 AC040896.1-201ENST00000613819 479 ntBASIC1.07□□□□□ -2.24
SLC1A1P43005 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.07□□□□□ -2.24
SLC1A1P43005 AL158063.1-201ENST00000615349 536 ntBASIC1.07□□□□□ -2.24
SLC1A1P43005 AC009509.4-201ENST00000619202 509 ntBASIC1.07□□□□□ -2.24
SLC1A1P43005 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.06□□□□□ -2.24
SLC1A1P43005 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.06□□□□□ -2.24
SLC1A1P43005 Y_RNA.1-201ENST00000352915 104 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 RNU6-1305P-201ENST00000364353 104 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 Y_RNA.327-201ENST00000365201 102 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 MIR515-2-201ENST00000384883 83 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 MIR515-1-201ENST00000384884 83 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SLC1A1P43005 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
SLC1A1P43005 AC092447.3-201ENST00000426027 686 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.06□□□□□ -2.24
SLC1A1P43005 RPS3AP17-201ENST00000472594 777 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 AC087343.1-201ENST00000477341 475 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.06□□□□□ -2.24
SLC1A1P43005 AF186996.7-201ENST00000492781 209 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 AL163195.1-201ENST00000496941 348 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 HMGN1P12-201ENST00000499125 195 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.06□□□□□ -2.24
SLC1A1P43005 RNU6-1146P-201ENST00000516282 102 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 SNORA40.12-201ENST00000516329 111 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.06□□□□□ -2.24
SLC1A1P43005 MIR4742-201ENST00000581069 85 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 FGF7P1-201ENST00000582820 288 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 MZT1P2-201ENST00000604387 248 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 BNIP3P10-201ENST00000605360 577 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 AL355802.3-201ENST00000607571 545 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 AL121757.2-201ENST00000611223 313 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 AC139792.3-201ENST00000623525 224 ntBASIC1.06□□□□□ -2.24
SLC1A1P43005 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 Y_RNA.287-201ENST00000364853 94 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 Y_RNA.296-201ENST00000364930 108 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 RNA5SP259-201ENST00000365541 109 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 Y_RNA.378-201ENST00000365652 113 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 MIR586-201ENST00000385035 97 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SLC1A1P43005 RNU6-57P-201ENST00000411348 103 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.05□□□□□ -2.24
SLC1A1P43005 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.05□□□□□ -2.24
SLC1A1P43005 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.05□□□□□ -2.24
SLC1A1P43005 AC074290.1-201ENST00000448883 135 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 RNU6-956P-201ENST00000458868 103 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 AC007215.1-201ENST00000464893 276 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 HMGB1P29-201ENST00000505659 499 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 RNA5SP401-201ENST00000515920 127 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 RNU6-1053P-201ENST00000515930 101 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SLC1A1P43005 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.05□□□□□ -2.24
SLC1A1P43005 AL157687.1-201ENST00000554853 619 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 MIR5692C1-201ENST00000585309 91 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 AL359821.1-201ENST00000605519 182 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.05□□□□□ -2.24
SLC1A1P43005 MIR8065-201ENST00000620577 100 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 OR5AK4P-201ENST00000635912 903 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 MTND4P5-201ENST00000435821 1374 ntBASIC1.05□□□□□ -2.24
SLC1A1P43005 RNU4-66P-201ENST00000365199 138 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 RNY3P9-201ENST00000384727 106 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 RNA5SP109-201ENST00000391010 116 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 RNA5SP323-201ENST00000391094 133 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 RNA5SP467-201ENST00000391274 118 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 MIR1253-201ENST00000408273 105 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 RPL37P10-201ENST00000412884 288 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.04□□□□□ -2.24
SLC1A1P43005 Z82205.1-201ENST00000428456 297 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 TIMM9P3-201ENST00000428659 274 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.04□□□□□ -2.24
SLC1A1P43005 RNU7-57P-201ENST00000459540 60 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 BET1P1-201ENST00000482276 359 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 RN7SKP298-201ENST00000515950 94 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 SNORA19.2-201ENST00000516013 114 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.04□□□□□ -2.24
SLC1A1P43005 SNRPGP20-201ENST00000604477 205 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 AC121247.2-201ENST00000604776 136 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 AC091895.1-201ENST00000624494 256 ntBASIC1.04□□□□□ -2.24
SLC1A1P43005 RNU6-38P-201ENST00000384085 107 ntBASIC1.03□□□□□ -2.24
SLC1A1P43005 RPL21P1-201ENST00000399532 476 ntBASIC1.03□□□□□ -2.24
SLC1A1P43005 AL356776.1-201ENST00000406574 447 ntBASIC1.03□□□□□ -2.24
SLC1A1P43005 RNU6-325P-201ENST00000411132 105 ntBASIC1.03□□□□□ -2.24
SLC1A1P43005 MRPS10P2-201ENST00000431226 381 ntBASIC1.03□□□□□ -2.24
SLC1A1P43005 AL359672.1-201ENST00000442302 409 ntBASIC1.03□□□□□ -2.24
SLC1A1P43005 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.03□□□□□ -2.24
SLC1A1P43005 AC092436.3-201ENST00000511788 257 ntBASIC1.03□□□□□ -2.24
SLC1A1P43005 TRMT112P2-201ENST00000512910 132 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms