Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC007395.1-201ENST00000451333 677 ntBASIC2.62□□□□□ -1.99
EPHA3P29320 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.62□□□□□ -1.99
EPHA3P29320 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.62□□□□□ -1.99
EPHA3P29320 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.62□□□□□ -1.99
EPHA3P29320 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.62□□□□□ -1.99
EPHA3P29320 RNU6-1098P-201ENST00000516772 96 ntBASIC2.62□□□□□ -1.99
EPHA3P29320 Y_RNA.713-201ENST00000517013 96 ntBASIC2.62□□□□□ -1.99
EPHA3P29320 RNU1-117P-201ENST00000517041 158 ntBASIC2.62□□□□□ -1.99
EPHA3P29320 AL161670.1-201ENST00000554348 137 ntBASIC2.62□□□□□ -1.99
EPHA3P29320 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.62□□□□□ -1.99
EPHA3P29320 MIR376A1-201ENST00000616574 68 ntBASIC2.62□□□□□ -1.99
EPHA3P29320 DEFA7P-201ENST00000382676 285 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 Y_RNA.396-201ENST00000383949 103 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 Y_RNA.452-201ENST00000384202 108 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 RNU6-505P-201ENST00000384427 107 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 MIR627-201ENST00000384979 97 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 RNA5SP210-201ENST00000391034 120 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.61□□□□□ -1.99
EPHA3P29320 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.61□□□□□ -1.99
EPHA3P29320 AC104332.2-201ENST00000429959 156 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.61□□□□□ -1.99
EPHA3P29320 AL161788.1-201ENST00000441805 169 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 Z96811.1-201ENST00000445880 108 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 RPS29P26-201ENST00000477483 171 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.61□□□□□ -1.99
EPHA3P29320 RNU5F-4P-201ENST00000516581 114 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 AP003733.2-201ENST00000529409 171 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.61□□□□□ -1.99
EPHA3P29320 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.61□□□□□ -1.99
EPHA3P29320 MIR4300-201ENST00000581016 96 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 MIR4635-201ENST00000583759 79 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.61□□□□□ -1.99
EPHA3P29320 AC005000.2-201ENST00000605468 310 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 U4.1-201ENST00000620349 87 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 MIR8062-201ENST00000621515 85 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 AC010297.1-201ENST00000623948 149 ntBASIC2.61□□□□□ -1.99
EPHA3P29320 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.61□□□□□ -1.99
EPHA3P29320 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.61□□□□□ -1.99
EPHA3P29320 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.61□□□□□ -1.99
EPHA3P29320 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
EPHA3P29320 RNU6-626P-201ENST00000363354 107 ntBASIC2.6□□□□□ -1.99
EPHA3P29320 RNU1-23P-201ENST00000363361 144 ntBASIC2.6□□□□□ -1.99
EPHA3P29320 Y_RNA.193-201ENST00000363979 102 ntBASIC2.6□□□□□ -1.99
EPHA3P29320 RNU6-20P-201ENST00000384106 107 ntBASIC2.6□□□□□ -1.99
EPHA3P29320 CBX3P6-201ENST00000430257 527 ntBASIC2.6□□□□□ -1.99
EPHA3P29320 AC005002.2-201ENST00000438228 269 ntBASIC2.6□□□□□ -1.99
EPHA3P29320 RNU6-625P-201ENST00000459412 107 ntBASIC2.6□□□□□ -1.99
EPHA3P29320 RPS23P5-201ENST00000495419 428 ntBASIC2.6□□□□□ -1.99
EPHA3P29320 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.6□□□□□ -1.99
EPHA3P29320 RNU6-1143P-201ENST00000516125 104 ntBASIC2.6□□□□□ -1.99
EPHA3P29320 RNU6-344P-201ENST00000516635 111 ntBASIC2.6□□□□□ -1.99
EPHA3P29320 RNU6-570P-201ENST00000517051 105 ntBASIC2.6□□□□□ -1.99
EPHA3P29320 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.6□□□□□ -1.99
EPHA3P29320 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.6□□□□□ -1.99
EPHA3P29320 AC018448.1-201ENST00000552843 316 ntBASIC2.6□□□□□ -1.99
EPHA3P29320 SNORD11B-201ENST00000607707 90 ntBASIC2.6□□□□□ -1.99
EPHA3P29320 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.6□□□□□ -1.99
EPHA3P29320 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.6□□□□□ -1.99
EPHA3P29320 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
EPHA3P29320 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.6□□□□□ -1.99
EPHA3P29320 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.59□□□□□ -1.99
EPHA3P29320 MIR422A-201ENST00000362286 90 ntBASIC2.59□□□□□ -1.99
EPHA3P29320 RNA5SP125-201ENST00000364843 120 ntBASIC2.59□□□□□ -1.99
EPHA3P29320 Y_RNA.376-201ENST00000365638 108 ntBASIC2.59□□□□□ -1.99
EPHA3P29320 Y_RNA.461-201ENST00000384263 103 ntBASIC2.59□□□□□ -1.99
EPHA3P29320 MIR215-201ENST00000384858 110 ntBASIC2.59□□□□□ -1.99
EPHA3P29320 RNA5SP504-201ENST00000410676 117 ntBASIC2.59□□□□□ -1.99
EPHA3P29320 ELOCP21-201ENST00000412558 336 ntBASIC2.59□□□□□ -1.99
EPHA3P29320 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.59□□□□□ -1.99
EPHA3P29320 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.59□□□□□ -1.99
EPHA3P29320 AL445687.1-201ENST00000439946 251 ntBASIC2.59□□□□□ -1.99
EPHA3P29320 UBBP3-201ENST00000445497 241 ntBASIC2.59□□□□□ -1.99
EPHA3P29320 CYP2C59P-201ENST00000457790 269 ntBASIC2.59□□□□□ -1.99
EPHA3P29320 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.59□□□□□ -1.99
EPHA3P29320 AC025465.3-201ENST00000510570 311 ntBASIC2.59□□□□□ -1.99
EPHA3P29320 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.59□□□□□ -1.99
EPHA3P29320 AC233702.2-202ENST00000562547 291 ntBASIC2.59□□□□□ -1.99
EPHA3P29320 AL162274.2-201ENST00000614406 332 ntBASIC2.59□□□□□ -1.99
EPHA3P29320 LINC02555-201ENST00000563933 1951 ntBASIC2.59□□□□□ -2
EPHA3P29320 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.59□□□□□ -2
EPHA3P29320 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
EPHA3P29320 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.59□□□□□ -2
EPHA3P29320 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
EPHA3P29320 RNU6-1180P-201ENST00000364935 107 ntBASIC2.58□□□□□ -2
EPHA3P29320 RNU6-234P-201ENST00000365229 104 ntBASIC2.58□□□□□ -2
EPHA3P29320 Y_RNA.483-201ENST00000384380 101 ntBASIC2.58□□□□□ -2
EPHA3P29320 Y_RNA.498-201ENST00000384460 102 ntBASIC2.58□□□□□ -2
EPHA3P29320 MT-TW-201ENST00000387382 68 ntBASIC2.58□□□□□ -2
EPHA3P29320 SNORD115-46-201ENST00000390982 71 ntBASIC2.58□□□□□ -2
EPHA3P29320 NDUFB4P4-201ENST00000404822 243 ntBASIC2.58□□□□□ -2
EPHA3P29320 Y_RNA.602-201ENST00000410535 92 ntBASIC2.58□□□□□ -2
EPHA3P29320 RNU2-63P-201ENST00000410792 194 ntBASIC2.58□□□□□ -2
EPHA3P29320 RNU2-32P-201ENST00000411193 191 ntBASIC2.58□□□□□ -2
EPHA3P29320 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.58□□□□□ -2
EPHA3P29320 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.58□□□□□ -2
EPHA3P29320 RNU7-14P-201ENST00000459331 62 ntBASIC2.58□□□□□ -2
EPHA3P29320 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.58□□□□□ -2
EPHA3P29320 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.58□□□□□ -2
EPHA3P29320 RNU6-107P-201ENST00000516643 102 ntBASIC2.58□□□□□ -2
EPHA3P29320 CYCSP23-201ENST00000519781 313 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms