Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 Y_RNA.339-201ENST00000365325 102 ntBASIC1.72□□□□□ -2.13
RPA1P27694 Y_RNA.504-201ENST00000384481 104 ntBASIC1.72□□□□□ -2.13
RPA1P27694 MIR517C-201ENST00000385103 95 ntBASIC1.72□□□□□ -2.13
RPA1P27694 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.72□□□□□ -2.13
RPA1P27694 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.72□□□□□ -2.13
RPA1P27694 USP9YP30-201ENST00000430729 455 ntBASIC1.72□□□□□ -2.13
RPA1P27694 Z82188.1-201ENST00000436709 154 ntBASIC1.72□□□□□ -2.13
RPA1P27694 RNU6-1037P-201ENST00000459571 107 ntBASIC1.72□□□□□ -2.13
RPA1P27694 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.72□□□□□ -2.13
RPA1P27694 MTND5P5-201ENST00000503764 376 ntBASIC1.72□□□□□ -2.13
RPA1P27694 AC103851.1-201ENST00000506833 274 ntBASIC1.72□□□□□ -2.13
RPA1P27694 AC096745.1-201ENST00000509945 370 ntBASIC1.72□□□□□ -2.13
RPA1P27694 RNU7-30P-201ENST00000516835 62 ntBASIC1.72□□□□□ -2.13
RPA1P27694 SNORA20.3-201ENST00000516880 132 ntBASIC1.72□□□□□ -2.13
RPA1P27694 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.72□□□□□ -2.13
RPA1P27694 SUB1P4-201ENST00000566062 339 ntBASIC1.72□□□□□ -2.13
RPA1P27694 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.72□□□□□ -2.13
RPA1P27694 Z98751.3-201ENST00000604447 521 ntBASIC1.72□□□□□ -2.13
RPA1P27694 AC009033.1-201ENST00000624279 431 ntBASIC1.72□□□□□ -2.13
RPA1P27694 AL359757.2-201ENST00000624309 274 ntBASIC1.72□□□□□ -2.13
RPA1P27694 SNORD114-6-201ENST00000364393 72 ntBASIC1.71□□□□□ -2.14
RPA1P27694 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.71□□□□□ -2.14
RPA1P27694 RNU6-842P-201ENST00000384269 107 ntBASIC1.71□□□□□ -2.14
RPA1P27694 RNU6-378P-201ENST00000384324 107 ntBASIC1.71□□□□□ -2.14
RPA1P27694 FGF7P8-201ENST00000402994 292 ntBASIC1.71□□□□□ -2.14
RPA1P27694 MIR548F5-201ENST00000408421 86 ntBASIC1.71□□□□□ -2.14
RPA1P27694 RNA5SP118-201ENST00000410385 109 ntBASIC1.71□□□□□ -2.14
RPA1P27694 RPS20P15-201ENST00000412792 311 ntBASIC1.71□□□□□ -2.14
RPA1P27694 MTND3P8-201ENST00000412909 339 ntBASIC1.71□□□□□ -2.14
RPA1P27694 MTCO3P46-201ENST00000425787 232 ntBASIC1.71□□□□□ -2.14
RPA1P27694 RPS3AP52-201ENST00000435639 297 ntBASIC1.71□□□□□ -2.14
RPA1P27694 MTND1P17-201ENST00000448961 204 ntBASIC1.71□□□□□ -2.14
RPA1P27694 AC079354.2-201ENST00000453523 154 ntBASIC1.71□□□□□ -2.14
RPA1P27694 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.71□□□□□ -2.14
RPA1P27694 AF186996.7-201ENST00000492781 209 ntBASIC1.71□□□□□ -2.14
RPA1P27694 AC021146.2-201ENST00000504736 556 ntBASIC1.71□□□□□ -2.14
RPA1P27694 RNU6-120P-201ENST00000516077 103 ntBASIC1.71□□□□□ -2.14
RPA1P27694 RNVU1-2-201ENST00000516326 135 ntBASIC1.71□□□□□ -2.14
RPA1P27694 RNU6-1213P-201ENST00000517075 94 ntBASIC1.71□□□□□ -2.14
RPA1P27694 DEFB131C-201ENST00000528817 165 ntBASIC1.71□□□□□ -2.14
RPA1P27694 SNORD53B-201ENST00000577887 78 ntBASIC1.71□□□□□ -2.14
RPA1P27694 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.71□□□□□ -2.14
RPA1P27694 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.71□□□□□ -2.14
RPA1P27694 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.71□□□□□ -2.14
RPA1P27694 AL359697.1-201ENST00000624879 587 ntBASIC1.71□□□□□ -2.14
RPA1P27694 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.71□□□□□ -2.14
RPA1P27694 MTND5P9-201ENST00000503854 1755 ntBASIC1.7□□□□□ -2.14
RPA1P27694 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RPA1P27694 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.7□□□□□ -2.14
RPA1P27694 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RPA1P27694 RNU6-60P-201ENST00000364792 103 ntBASIC1.7□□□□□ -2.14
RPA1P27694 RNA5SP363-201ENST00000365072 115 ntBASIC1.7□□□□□ -2.14
RPA1P27694 RNU6-214P-201ENST00000384130 107 ntBASIC1.7□□□□□ -2.14
RPA1P27694 MIR521-1-201ENST00000384902 87 ntBASIC1.7□□□□□ -2.14
RPA1P27694 MIR517A-201ENST00000385001 87 ntBASIC1.7□□□□□ -2.14
RPA1P27694 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RPA1P27694 SNORA17.3-201ENST00000391159 129 ntBASIC1.7□□□□□ -2.14
RPA1P27694 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPA1P27694 MIR1323-201ENST00000408090 73 ntBASIC1.7□□□□□ -2.14
RPA1P27694 AC012306.1-201ENST00000423267 114 ntBASIC1.7□□□□□ -2.14
RPA1P27694 AC007395.1-201ENST00000451333 677 ntBASIC1.7□□□□□ -2.14
RPA1P27694 AC091951.2-201ENST00000500762 203 ntBASIC1.7□□□□□ -2.14
RPA1P27694 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.7□□□□□ -2.14
RPA1P27694 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.7□□□□□ -2.14
RPA1P27694 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.7□□□□□ -2.14
RPA1P27694 RNU5F-4P-201ENST00000516581 114 ntBASIC1.7□□□□□ -2.14
RPA1P27694 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.7□□□□□ -2.14
RPA1P27694 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.7□□□□□ -2.14
RPA1P27694 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.7□□□□□ -2.14
RPA1P27694 MIR4801-201ENST00000582704 82 ntBASIC1.7□□□□□ -2.14
RPA1P27694 AL353997.5-201ENST00000618886 171 ntBASIC1.7□□□□□ -2.14
RPA1P27694 AC099654.5-201ENST00000636479 350 ntBASIC1.7□□□□□ -2.14
RPA1P27694 AC099654.14-201ENST00000638599 341 ntBASIC1.7□□□□□ -2.14
RPA1P27694 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.7□□□□□ -2.14
RPA1P27694 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.7□□□□□ -2.14
RPA1P27694 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
RPA1P27694 RNU6-845P-201ENST00000362578 103 ntBASIC1.69□□□□□ -2.14
RPA1P27694 RNU6-227P-201ENST00000362865 103 ntBASIC1.69□□□□□ -2.14
RPA1P27694 SNORA29-201ENST00000384183 140 ntBASIC1.69□□□□□ -2.14
RPA1P27694 MIR548K-201ENST00000408406 116 ntBASIC1.69□□□□□ -2.14
RPA1P27694 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.69□□□□□ -2.14
RPA1P27694 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.69□□□□□ -2.14
RPA1P27694 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.69□□□□□ -2.14
RPA1P27694 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.69□□□□□ -2.14
RPA1P27694 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.69□□□□□ -2.14
RPA1P27694 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.69□□□□□ -2.14
RPA1P27694 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.69□□□□□ -2.14
RPA1P27694 MIR4790-201ENST00000577799 79 ntBASIC1.69□□□□□ -2.14
RPA1P27694 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.69□□□□□ -2.14
RPA1P27694 AC011712.1-201ENST00000588959 234 ntBASIC1.69□□□□□ -2.14
RPA1P27694 MIR8074-201ENST00000615081 81 ntBASIC1.69□□□□□ -2.14
RPA1P27694 MIR6128-201ENST00000615528 109 ntBASIC1.69□□□□□ -2.14
RPA1P27694 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RPA1P27694 AC009541.1-201ENST00000438279 2662 ntBASIC1.69□□□□□ -2.14
RPA1P27694 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RPA1P27694 RNU1-76P-201ENST00000362903 159 ntBASIC1.68□□□□□ -2.14
RPA1P27694 RNU5B-2P-201ENST00000363036 113 ntBASIC1.68□□□□□ -2.14
RPA1P27694 RNU6-457P-201ENST00000363999 107 ntBASIC1.68□□□□□ -2.14
RPA1P27694 Y_RNA.404-201ENST00000383978 102 ntBASIC1.68□□□□□ -2.14
RPA1P27694 RNU6-767P-201ENST00000384132 107 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms