Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 UBE2DNL-203ENST00000474922 222 ntBASIC3.86□□□□□ -1.79
HOXD8P13378 RNU4-57P-201ENST00000515980 135 ntBASIC3.86□□□□□ -1.79
HOXD8P13378 SNORA70.14-201ENST00000516205 110 ntBASIC3.86□□□□□ -1.79
HOXD8P13378 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.86□□□□□ -1.79
HOXD8P13378 AC024614.2-201ENST00000577584 372 ntBASIC3.86□□□□□ -1.79
HOXD8P13378 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD8P13378 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD8P13378 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXD8P13378 AP001486.2-201ENST00000561652 5113 ntBASIC3.86□□□□□ -1.79
HOXD8P13378 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
HOXD8P13378 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD8P13378 AC069528.2-201ENST00000624849 1991 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HOXD8P13378 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXD8P13378 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXD8P13378 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXD8P13378 AC026241.1-201ENST00000517873 2142 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
HOXD8P13378 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXD8P13378 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXD8P13378 Y_RNA.310-201ENST00000365063 113 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 RNU6-1056P-201ENST00000383996 107 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 RNU6-198P-201ENST00000384258 104 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 RNU6-460P-201ENST00000391158 108 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 RNU2-37P-201ENST00000410695 177 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 AIMP1P2-201ENST00000425294 312 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 EEF1B2P7-201ENST00000451177 676 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 HMGN2P7-201ENST00000456186 273 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 RPS3P1-201ENST00000456781 192 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXD8P13378 MIR2114-201ENST00000516645 80 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 RNU2-56P-201ENST00000516826 190 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 AP001328.1-201ENST00000528550 176 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 MIR4644-201ENST00000579929 84 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 AC025754.2-201ENST00000606491 432 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXD8P13378 MAPK10-373ENST00000641983 6772 ntBASIC3.85□□□□□ -1.79
HOXD8P13378 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXD8P13378 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXD8P13378 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXD8P13378 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXD8P13378 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HOXD8P13378 RNU6-834P-201ENST00000362367 110 ntBASIC3.84□□□□□ -1.79
HOXD8P13378 RNU6-283P-201ENST00000364788 107 ntBASIC3.84□□□□□ -1.79
HOXD8P13378 RNU6-1180P-201ENST00000364935 107 ntBASIC3.84□□□□□ -1.79
HOXD8P13378 SNORD6-201ENST00000365444 73 ntBASIC3.84□□□□□ -1.79
HOXD8P13378 RNU6-1228P-201ENST00000391014 107 ntBASIC3.84□□□□□ -1.79
HOXD8P13378 MIR1183-201ENST00000408856 89 ntBASIC3.84□□□□□ -1.79
HOXD8P13378 AC006989.1-201ENST00000427212 131 ntBASIC3.84□□□□□ -1.79
HOXD8P13378 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.84□□□□□ -1.79
HOXD8P13378 RPS29P31-201ENST00000446147 164 ntBASIC3.84□□□□□ -1.79
HOXD8P13378 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXD8P13378 FCF1P8-201ENST00000510322 597 ntBASIC3.84□□□□□ -1.79
HOXD8P13378 PHBP14-201ENST00000512887 367 ntBASIC3.84□□□□□ -1.79
HOXD8P13378 MIR486-1-201ENST00000612171 68 ntBASIC3.84□□□□□ -1.79
HOXD8P13378 AC068647.2-201ENST00000637380 353 ntBASIC3.84□□□□□ -1.79
HOXD8P13378 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXD8P13378 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXD8P13378 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXD8P13378 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
HOXD8P13378 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HOXD8P13378 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HOXD8P13378 RNU6-144P-201ENST00000383951 107 ntBASIC3.83□□□□□ -1.8
HOXD8P13378 RNU6-383P-201ENST00000410864 94 ntBASIC3.83□□□□□ -1.8
HOXD8P13378 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXD8P13378 HMGN2P20-201ENST00000437531 273 ntBASIC3.83□□□□□ -1.8
HOXD8P13378 RPS27P1-201ENST00000450552 247 ntBASIC3.83□□□□□ -1.8
HOXD8P13378 HMGN2P16-201ENST00000456802 261 ntBASIC3.83□□□□□ -1.8
HOXD8P13378 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXD8P13378 AC012531.5-201ENST00000611375 151 ntBASIC3.83□□□□□ -1.8
HOXD8P13378 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXD8P13378 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXD8P13378 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
HOXD8P13378 Z83843.1-201ENST00000604070 3685 ntBASIC3.82□□□□□ -1.8
HOXD8P13378 OTUD4P1-201ENST00000237841 3067 ntBASIC3.82□□□□□ -1.8
HOXD8P13378 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXD8P13378 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD8P13378 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
HOXD8P13378 RNU6-153P-201ENST00000364422 104 ntBASIC3.82□□□□□ -1.8
HOXD8P13378 RNU1-57P-201ENST00000384491 166 ntBASIC3.82□□□□□ -1.8
HOXD8P13378 MIR518C-201ENST00000384822 101 ntBASIC3.82□□□□□ -1.8
HOXD8P13378 MIR548B-201ENST00000385247 97 ntBASIC3.82□□□□□ -1.8
HOXD8P13378 SNORA12-201ENST00000391162 147 ntBASIC3.82□□□□□ -1.8
HOXD8P13378 RPL23AP62-201ENST00000463396 453 ntBASIC3.82□□□□□ -1.8
HOXD8P13378 AC026333.2-201ENST00000542164 106 ntBASIC3.82□□□□□ -1.8
HOXD8P13378 MIR3646-201ENST00000578301 84 ntBASIC3.82□□□□□ -1.8
HOXD8P13378 MIR5004-201ENST00000579078 107 ntBASIC3.82□□□□□ -1.8
HOXD8P13378 MIR5688-201ENST00000580619 83 ntBASIC3.82□□□□□ -1.8
HOXD8P13378 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD8P13378 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD8P13378 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD8P13378 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD8P13378 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXD8P13378 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXD8P13378 ZNF702P-202ENST00000434269 1966 ntBASIC3.82□□□□□ -1.8
HOXD8P13378 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXD8P13378 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD8P13378 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HOXD8P13378 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXD8P13378 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms