Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RHOP08100 MIR26A1-201ENST00000362205 77 ntBASIC2.81□□□□□ -1.96
RHOP08100 Y_RNA.20-201ENST00000362479 113 ntBASIC2.81□□□□□ -1.96
RHOP08100 SNORD113-8-201ENST00000363497 74 ntBASIC2.81□□□□□ -1.96
RHOP08100 RNU6-1210P-201ENST00000363775 107 ntBASIC2.81□□□□□ -1.96
RHOP08100 Y_RNA.237-201ENST00000364439 102 ntBASIC2.81□□□□□ -1.96
RHOP08100 Y_RNA.416-201ENST00000384014 113 ntBASIC2.81□□□□□ -1.96
RHOP08100 RNU6-926P-201ENST00000384075 107 ntBASIC2.81□□□□□ -1.96
RHOP08100 RNU1-57P-201ENST00000384491 166 ntBASIC2.81□□□□□ -1.96
RHOP08100 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.81□□□□□ -1.96
RHOP08100 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.81□□□□□ -1.96
RHOP08100 MTND4LP30-201ENST00000454092 297 ntBASIC2.81□□□□□ -1.96
RHOP08100 AL121594.1-201ENST00000475906 575 ntBASIC2.81□□□□□ -1.96
RHOP08100 TRBV12-1-201ENST00000479785 344 ntBASIC2.81□□□□□ -1.96
RHOP08100 RPL23AP70-201ENST00000483361 460 ntBASIC2.81□□□□□ -1.96
RHOP08100 AC107222.1-201ENST00000510899 637 ntBASIC2.81□□□□□ -1.96
RHOP08100 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.81□□□□□ -1.96
RHOP08100 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.81□□□□□ -1.96
RHOP08100 AC010999.1-201ENST00000611856 324 ntBASIC2.81□□□□□ -1.96
RHOP08100 AC078938.1-201ENST00000620993 318 ntBASIC2.81□□□□□ -1.96
RHOP08100 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.81□□□□□ -1.96
RHOP08100 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.8□□□□□ -1.96
RHOP08100 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.8□□□□□ -1.96
RHOP08100 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RHOP08100 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.8□□□□□ -1.96
RHOP08100 AL391987.6-201ENST00000305671 199 ntBASIC2.8□□□□□ -1.96
RHOP08100 Y_RNA.230-201ENST00000364348 109 ntBASIC2.8□□□□□ -1.96
RHOP08100 SNORA20.1-201ENST00000364790 130 ntBASIC2.8□□□□□ -1.96
RHOP08100 SNORA51.4-201ENST00000364993 124 ntBASIC2.8□□□□□ -1.96
RHOP08100 Y_RNA.541-201ENST00000384640 113 ntBASIC2.8□□□□□ -1.96
RHOP08100 SNORD58.1-201ENST00000391313 66 ntBASIC2.8□□□□□ -1.96
RHOP08100 MIR208B-201ENST00000401172 77 ntBASIC2.8□□□□□ -1.96
RHOP08100 CBX3P9-201ENST00000402326 552 ntBASIC2.8□□□□□ -1.96
RHOP08100 RNU5A-5P-201ENST00000411054 116 ntBASIC2.8□□□□□ -1.96
RHOP08100 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.8□□□□□ -1.96
RHOP08100 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.8□□□□□ -1.96
RHOP08100 HSPE1P25-201ENST00000455484 251 ntBASIC2.8□□□□□ -1.96
RHOP08100 AC073901.1-201ENST00000462471 408 ntBASIC2.8□□□□□ -1.96
RHOP08100 SEM1P1-201ENST00000506694 209 ntBASIC2.8□□□□□ -1.96
RHOP08100 SNORA40.9-201ENST00000515895 93 ntBASIC2.8□□□□□ -1.96
RHOP08100 RNU6-1338P-201ENST00000516328 91 ntBASIC2.8□□□□□ -1.96
RHOP08100 Y_RNA.683-201ENST00000516508 93 ntBASIC2.8□□□□□ -1.96
RHOP08100 SNORA31.26-201ENST00000517250 137 ntBASIC2.8□□□□□ -1.96
RHOP08100 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.8□□□□□ -1.96
RHOP08100 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.8□□□□□ -1.96
RHOP08100 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.8□□□□□ -1.96
RHOP08100 MAPK10-266ENST00000641066 6555 ntBASIC2.8□□□□□ -1.96
RHOP08100 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RHOP08100 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.79□□□□□ -1.96
RHOP08100 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RHOP08100 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RHOP08100 ZNF204P-201ENST00000416749 2397 ntBASIC2.79□□□□□ -1.96
RHOP08100 RNU4-15P-201ENST00000362613 141 ntBASIC2.79□□□□□ -1.96
RHOP08100 RNU4-90P-201ENST00000362773 141 ntBASIC2.79□□□□□ -1.96
RHOP08100 RNU6-655P-201ENST00000362858 107 ntBASIC2.79□□□□□ -1.96
RHOP08100 RNU6-290P-201ENST00000365212 101 ntBASIC2.79□□□□□ -1.96
RHOP08100 Y_RNA.352-201ENST00000365439 102 ntBASIC2.79□□□□□ -1.96
RHOP08100 RNU6-102P-201ENST00000384485 104 ntBASIC2.79□□□□□ -1.96
RHOP08100 Y_RNA.570-201ENST00000384750 101 ntBASIC2.79□□□□□ -1.96
RHOP08100 RNA5SP344-201ENST00000411081 104 ntBASIC2.79□□□□□ -1.96
RHOP08100 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.79□□□□□ -1.96
RHOP08100 AL390729.2-201ENST00000416137 156 ntBASIC2.79□□□□□ -1.96
RHOP08100 AL513477.1-202ENST00000417061 214 ntBASIC2.79□□□□□ -1.96
RHOP08100 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.79□□□□□ -1.96
RHOP08100 AL445305.1-201ENST00000432577 575 ntBASIC2.79□□□□□ -1.96
RHOP08100 Z96811.1-201ENST00000445880 108 ntBASIC2.79□□□□□ -1.96
RHOP08100 RN7SL75P-201ENST00000461926 281 ntBASIC2.79□□□□□ -1.96
RHOP08100 RPL31P41-201ENST00000477967 372 ntBASIC2.79□□□□□ -1.96
RHOP08100 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.79□□□□□ -1.96
RHOP08100 AC074133.1-201ENST00000515696 183 ntBASIC2.79□□□□□ -1.96
RHOP08100 DEFB108E-201ENST00000524692 240 ntBASIC2.79□□□□□ -1.96
RHOP08100 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.79□□□□□ -1.96
RHOP08100 AC026470.2-201ENST00000561492 181 ntBASIC2.79□□□□□ -1.96
RHOP08100 AC233702.2-202ENST00000562547 291 ntBASIC2.79□□□□□ -1.96
RHOP08100 AC104984.5-201ENST00000586878 94 ntBASIC2.79□□□□□ -1.96
RHOP08100 AL442067.1-201ENST00000613261 223 ntBASIC2.79□□□□□ -1.96
RHOP08100 PCGEM1.1-201ENST00000613431 131 ntBASIC2.79□□□□□ -1.96
RHOP08100 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RHOP08100 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RHOP08100 AC026241.1-201ENST00000517873 2142 ntBASIC2.78□□□□□ -1.96
RHOP08100 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.78□□□□□ -1.96
RHOP08100 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
RHOP08100 RNU1-62P-201ENST00000362599 164 ntBASIC2.78□□□□□ -1.96
RHOP08100 Y_RNA.477-201ENST00000384352 108 ntBASIC2.78□□□□□ -1.96
RHOP08100 SNORA67.4-201ENST00000384688 142 ntBASIC2.78□□□□□ -1.96
RHOP08100 MIR181A2-201ENST00000384863 110 ntBASIC2.78□□□□□ -1.96
RHOP08100 AL139095.1-201ENST00000404326 391 ntBASIC2.78□□□□□ -1.96
RHOP08100 MIR320B2-201ENST00000408479 138 ntBASIC2.78□□□□□ -1.96
RHOP08100 Y_RNA.595-201ENST00000410403 105 ntBASIC2.78□□□□□ -1.96
RHOP08100 RNU2-20P-201ENST00000410425 191 ntBASIC2.78□□□□□ -1.96
RHOP08100 BMS1P22-201ENST00000414726 313 ntBASIC2.78□□□□□ -1.96
RHOP08100 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.78□□□□□ -1.96
RHOP08100 AC104332.2-201ENST00000429959 156 ntBASIC2.78□□□□□ -1.96
RHOP08100 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.78□□□□□ -1.96
RHOP08100 Z98949.2-201ENST00000440996 144 ntBASIC2.78□□□□□ -1.96
RHOP08100 AC112771.1-201ENST00000463581 102 ntBASIC2.78□□□□□ -1.96
RHOP08100 RPL36AP48-201ENST00000485521 314 ntBASIC2.78□□□□□ -1.96
RHOP08100 AC008413.1-201ENST00000511864 177 ntBASIC2.78□□□□□ -1.96
RHOP08100 Y_RNA.673-201ENST00000516306 88 ntBASIC2.78□□□□□ -1.96
RHOP08100 SNORA25.14-201ENST00000516481 132 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms