Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RPL30P4-201ENST00000429309 333 ntBASIC3.33□□□□□ -1.88
APPP05067 AC005002.2-201ENST00000438228 269 ntBASIC3.33□□□□□ -1.88
APPP05067 AC105272.1-201ENST00000438604 198 ntBASIC3.33□□□□□ -1.88
APPP05067 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.33□□□□□ -1.88
APPP05067 AC107222.1-201ENST00000510899 637 ntBASIC3.33□□□□□ -1.88
APPP05067 RN7SKP49-201ENST00000516675 260 ntBASIC3.33□□□□□ -1.88
APPP05067 MIR2355-201ENST00000517199 87 ntBASIC3.33□□□□□ -1.88
APPP05067 RN7SKP40-201ENST00000517211 242 ntBASIC3.33□□□□□ -1.88
APPP05067 AC091144.1-201ENST00000519573 138 ntBASIC3.33□□□□□ -1.88
APPP05067 AC103810.1-201ENST00000579873 453 ntBASIC3.33□□□□□ -1.88
APPP05067 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.33□□□□□ -1.88
APPP05067 AC010999.1-201ENST00000611856 324 ntBASIC3.33□□□□□ -1.88
APPP05067 AC005520.5-201ENST00000613926 164 ntBASIC3.33□□□□□ -1.88
APPP05067 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.33□□□□□ -1.88
APPP05067 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
APPP05067 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.33□□□□□ -1.88
APPP05067 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.33□□□□□ -1.88
APPP05067 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
APPP05067 SNORD113-8-201ENST00000363497 74 ntBASIC3.32□□□□□ -1.88
APPP05067 Y_RNA.188-201ENST00000363952 111 ntBASIC3.32□□□□□ -1.88
APPP05067 RNU6-944P-201ENST00000364023 107 ntBASIC3.32□□□□□ -1.88
APPP05067 SNORD87-201ENST00000364849 89 ntBASIC3.32□□□□□ -1.88
APPP05067 Y_RNA.415-201ENST00000384012 112 ntBASIC3.32□□□□□ -1.88
APPP05067 RNU6-20P-201ENST00000384106 107 ntBASIC3.32□□□□□ -1.88
APPP05067 Y_RNA.447-201ENST00000384184 113 ntBASIC3.32□□□□□ -1.88
APPP05067 RNU6-1203P-201ENST00000410703 110 ntBASIC3.32□□□□□ -1.88
APPP05067 AL451074.5-201ENST00000415894 435 ntBASIC3.32□□□□□ -1.88
APPP05067 AL513477.1-202ENST00000417061 214 ntBASIC3.32□□□□□ -1.88
APPP05067 RNU6-1132P-201ENST00000459214 107 ntBASIC3.32□□□□□ -1.88
APPP05067 AC007215.1-201ENST00000464893 276 ntBASIC3.32□□□□□ -1.88
APPP05067 RNA5SP76-201ENST00000516277 87 ntBASIC3.32□□□□□ -1.88
APPP05067 AC079600.2-201ENST00000550076 130 ntBASIC3.32□□□□□ -1.88
APPP05067 MIR3128-201ENST00000581957 66 ntBASIC3.32□□□□□ -1.88
APPP05067 MIR3199-1-201ENST00000582434 88 ntBASIC3.32□□□□□ -1.88
APPP05067 AC012433.1-201ENST00000588916 398 ntBASIC3.32□□□□□ -1.88
APPP05067 AL138963.2-201ENST00000605137 226 ntBASIC3.32□□□□□ -1.88
APPP05067 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.32□□□□□ -1.88
APPP05067 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.32□□□□□ -1.88
APPP05067 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.32□□□□□ -1.88
APPP05067 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
APPP05067 MTND5P35-201ENST00000557537 1720 ntBASIC3.32□□□□□ -1.88
APPP05067 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
APPP05067 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
APPP05067 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APPP05067 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.31□□□□□ -1.88
APPP05067 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.31□□□□□ -1.88
APPP05067 RNU6-379P-201ENST00000363813 104 ntBASIC3.31□□□□□ -1.88
APPP05067 RNU1-112P-201ENST00000364401 164 ntBASIC3.31□□□□□ -1.88
APPP05067 Y_RNA.237-201ENST00000364439 102 ntBASIC3.31□□□□□ -1.88
APPP05067 AL138827.1-201ENST00000402666 306 ntBASIC3.31□□□□□ -1.88
APPP05067 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.31□□□□□ -1.88
APPP05067 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.31□□□□□ -1.88
APPP05067 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.31□□□□□ -1.88
APPP05067 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.31□□□□□ -1.88
APPP05067 RPS3P1-201ENST00000456781 192 ntBASIC3.31□□□□□ -1.88
APPP05067 TRBVB-201ENST00000477100 408 ntBASIC3.31□□□□□ -1.88
APPP05067 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.31□□□□□ -1.88
APPP05067 RNU6-388P-201ENST00000517012 105 ntBASIC3.31□□□□□ -1.88
APPP05067 RNU6-389P-201ENST00000517048 105 ntBASIC3.31□□□□□ -1.88
APPP05067 DEFB108E-201ENST00000524692 240 ntBASIC3.31□□□□□ -1.88
APPP05067 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.31□□□□□ -1.88
APPP05067 Y_RNA.772-201ENST00000606692 102 ntBASIC3.31□□□□□ -1.88
APPP05067 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.31□□□□□ -1.88
APPP05067 BX322639.1-202ENST00000423987 2213 ntBASIC3.31□□□□□ -1.88
APPP05067 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APPP05067 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
APPP05067 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.3□□□□□ -1.88
APPP05067 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
APPP05067 Y_RNA.60-201ENST00000362831 98 ntBASIC3.3□□□□□ -1.88
APPP05067 RNU6-626P-201ENST00000363354 107 ntBASIC3.3□□□□□ -1.88
APPP05067 Y_RNA.288-201ENST00000364854 92 ntBASIC3.3□□□□□ -1.88
APPP05067 SNORD21-201ENST00000383953 95 ntBASIC3.3□□□□□ -1.88
APPP05067 RNU6-1274P-201ENST00000384557 107 ntBASIC3.3□□□□□ -1.88
APPP05067 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
APPP05067 RNA5SP504-201ENST00000410676 117 ntBASIC3.3□□□□□ -1.88
APPP05067 AC004386.2-201ENST00000441858 148 ntBASIC3.3□□□□□ -1.88
APPP05067 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.3□□□□□ -1.88
APPP05067 HSPE1P25-201ENST00000455484 251 ntBASIC3.3□□□□□ -1.88
APPP05067 AC003982.1-202ENST00000469928 248 ntBASIC3.3□□□□□ -1.88
APPP05067 Y_RNA.673-201ENST00000516306 88 ntBASIC3.3□□□□□ -1.88
APPP05067 SCARNA24.2-201ENST00000516968 130 ntBASIC3.3□□□□□ -1.88
APPP05067 AK6P2-201ENST00000549020 471 ntBASIC3.3□□□□□ -1.88
APPP05067 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
APPP05067 AL713866.2-201ENST00000603579 219 ntBASIC3.3□□□□□ -1.88
APPP05067 AC078938.1-201ENST00000620993 318 ntBASIC3.3□□□□□ -1.88
APPP05067 LINC02555-201ENST00000563933 1951 ntBASIC3.29□□□□□ -1.88
APPP05067 AC069528.2-201ENST00000624849 1991 ntBASIC3.29□□□□□ -1.88
APPP05067 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
APPP05067 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
APPP05067 OR56A5-201ENST00000340110 738 ntBASIC3.29□□□□□ -1.88
APPP05067 Y_RNA.14-201ENST00000362415 103 ntBASIC3.29□□□□□ -1.88
APPP05067 RNU4-56P-201ENST00000364700 142 ntBASIC3.29□□□□□ -1.88
APPP05067 AL033519.2-201ENST00000403958 392 ntBASIC3.29□□□□□ -1.88
APPP05067 Y_RNA.597-201ENST00000410463 100 ntBASIC3.29□□□□□ -1.88
APPP05067 ELOCP21-201ENST00000412558 336 ntBASIC3.29□□□□□ -1.88
APPP05067 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.29□□□□□ -1.88
APPP05067 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.29□□□□□ -1.88
APPP05067 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.29□□□□□ -1.88
APPP05067 RNU6-1143P-201ENST00000516125 104 ntBASIC3.29□□□□□ -1.88
APPP05067 RNU1-117P-201ENST00000517041 158 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms