Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AP000907.4-201ENST00000604143 237 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 DISC2.1-201ENST00000612827 205 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 MIR8074-201ENST00000615081 81 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 AC126177.8-201ENST00000618339 1015 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 AL359757.2-201ENST00000624309 274 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HLA-DPB1P04440 WWP1P1-201ENST00000466609 2769 ntBASIC1.19□□□□□ -2.22
HLA-DPB1P04440 AC233981.2-201ENST00000611524 1614 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 ZNF209P-201ENST00000593450 2304 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HLA-DPB1P04440 SNORD50.1-201ENST00000362987 71 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 SNORA33-201ENST00000363664 130 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 RNU1-96P-201ENST00000364163 162 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 RNU6-482P-201ENST00000391068 107 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 C8orf59P1-201ENST00000429930 303 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DPB1P04440 NDUFA5P4-201ENST00000436704 385 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 UBE2V1P8-201ENST00000437166 265 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 HSPE1P9-201ENST00000440046 311 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 OR2AQ1P-201ENST00000451972 200 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 MTND1P11-201ENST00000456661 876 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 RN7SKP210-201ENST00000459176 261 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 RPL23AP75-201ENST00000491601 451 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 AC114801.2-201ENST00000503825 781 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DPB1P04440 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DPB1P04440 AC025465.3-201ENST00000510570 311 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 AC067942.3-201ENST00000512025 362 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 AC011406.1-201ENST00000512440 370 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 MTND1P35-201ENST00000526739 508 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 AC016957.1-201ENST00000534895 309 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 AL161670.1-201ENST00000554348 137 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 AC008269.2-201ENST00000561915 1105 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 SNORA77B-201ENST00000578179 125 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.18□□□□□ -2.22
HLA-DPB1P04440 AC069114.2-201ENST00000604699 304 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 TCL6_2.1-201ENST00000615162 119 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.18□□□□□ -2.22
HLA-DPB1P04440 AC095038.3-201ENST00000634439 195 ntBASIC1.18□□□□□ -2.22
HLA-DPB1P04440 BX322639.1-202ENST00000423987 2213 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 ZNF72P-201ENST00000425869 1908 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HLA-DPB1P04440 AC010615.1-201ENST00000594254 1764 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 RNY3P3-201ENST00000363816 102 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 RNU6-933P-201ENST00000384424 107 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 RNU6-95P-201ENST00000384697 107 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
HLA-DPB1P04440 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
HLA-DPB1P04440 MIR300-201ENST00000401138 83 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 MTCO1P21-201ENST00000416634 589 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 Z82205.1-201ENST00000428456 297 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 Z82188.1-201ENST00000436709 154 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DPB1P04440 MTCO3P18-201ENST00000440206 761 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 AC009237.7-201ENST00000447357 229 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DPB1P04440 AC079354.2-201ENST00000453523 154 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 AC007215.1-201ENST00000464893 276 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 FAM206BP-201ENST00000510179 541 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 RNU6-506P-201ENST00000516553 94 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 SNORA44.1-201ENST00000517031 108 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 AC084364.2-201ENST00000546924 395 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.17□□□□□ -2.22
HLA-DPB1P04440 AC245505.1-201ENST00000556398 224 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 AC026470.2-201ENST00000561492 181 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 MIR4753-201ENST00000585119 83 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 AC080013.6-201ENST00000606185 215 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 AL512598.1-201ENST00000610158 273 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DPB1P04440 SCARNA4-201ENST00000629045 128 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 MIR1321-201ENST00000637766 79 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 AC099654.12-201ENST00000639868 649 ntBASIC1.17□□□□□ -2.22
HLA-DPB1P04440 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DPB1P04440 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HLA-DPB1P04440 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.16□□□□□ -2.22
HLA-DPB1P04440 MIR520A-201ENST00000384862 85 ntBASIC1.16□□□□□ -2.22
HLA-DPB1P04440 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
HLA-DPB1P04440 RNU6-332P-201ENST00000391193 108 ntBASIC1.16□□□□□ -2.22
HLA-DPB1P04440 AL590002.1-201ENST00000406554 418 ntBASIC1.16□□□□□ -2.22
HLA-DPB1P04440 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.16□□□□□ -2.22
HLA-DPB1P04440 NFU1P2-201ENST00000448700 469 ntBASIC1.16□□□□□ -2.22
HLA-DPB1P04440 RPL26P26-201ENST00000480251 434 ntBASIC1.16□□□□□ -2.22
HLA-DPB1P04440 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.16□□□□□ -2.22
HLA-DPB1P04440 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.16□□□□□ -2.22
HLA-DPB1P04440 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.16□□□□□ -2.22
HLA-DPB1P04440 AL138726.1-201ENST00000614873 333 ntBASIC1.16□□□□□ -2.22
HLA-DPB1P04440 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
HLA-DPB1P04440 MIR338-201ENST00000636369 67 ntBASIC1.16□□□□□ -2.22
HLA-DPB1P04440 AC024614.3-201ENST00000637860 256 ntBASIC1.16□□□□□ -2.22
HLA-DPB1P04440 ZNF204P-201ENST00000416749 2397 ntBASIC1.15□□□□□ -2.22
HLA-DPB1P04440 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.15□□□□□ -2.22
HLA-DPB1P04440 RNU6-271P-201ENST00000363858 105 ntBASIC1.15□□□□□ -2.23
HLA-DPB1P04440 RNU6-1305P-201ENST00000364353 104 ntBASIC1.15□□□□□ -2.23
HLA-DPB1P04440 SNORA63D-201ENST00000364359 132 ntBASIC1.15□□□□□ -2.23
HLA-DPB1P04440 RNU6-128P-201ENST00000383976 107 ntBASIC1.15□□□□□ -2.23
HLA-DPB1P04440 Y_RNA.436-201ENST00000384097 102 ntBASIC1.15□□□□□ -2.23
HLA-DPB1P04440 RNU6-975P-201ENST00000384296 105 ntBASIC1.15□□□□□ -2.23
HLA-DPB1P04440 SNORA67.2-201ENST00000384300 149 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms