Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 NFU1P2-201ENST00000448700 469 ntBASIC0.41□□□□□ -2.34
APOEP02649 Y_RNA.672-201ENST00000516289 104 ntBASIC0.41□□□□□ -2.34
APOEP02649 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.41□□□□□ -2.34
APOEP02649 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.41□□□□□ -2.34
APOEP02649 AC009878.1-201ENST00000621819 340 ntBASIC0.41□□□□□ -2.34
APOEP02649 MTND5P17-201ENST00000418405 1603 ntBASIC0.4□□□□□ -2.35
APOEP02649 RNU6-1105P-201ENST00000384774 107 ntBASIC0.4□□□□□ -2.35
APOEP02649 RNA5SP193-201ENST00000410353 107 ntBASIC0.4□□□□□ -2.35
APOEP02649 AC244023.1-201ENST00000426884 112 ntBASIC0.4□□□□□ -2.35
APOEP02649 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.4□□□□□ -2.35
APOEP02649 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.4□□□□□ -2.35
APOEP02649 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.4□□□□□ -2.35
APOEP02649 RNU7-90P-201ENST00000459216 62 ntBASIC0.4□□□□□ -2.35
APOEP02649 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.4□□□□□ -2.35
APOEP02649 SNORA25.17-201ENST00000517184 124 ntBASIC0.4□□□□□ -2.35
APOEP02649 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.4□□□□□ -2.35
APOEP02649 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.4□□□□□ -2.35
APOEP02649 AP000811.1-201ENST00000603803 651 ntBASIC0.4□□□□□ -2.35
APOEP02649 AC242498.1-201ENST00000604134 111 ntBASIC0.4□□□□□ -2.35
APOEP02649 AC112191.3-201ENST00000604371 277 ntBASIC0.4□□□□□ -2.35
APOEP02649 AC002044.1-201ENST00000606707 158 ntBASIC0.4□□□□□ -2.35
APOEP02649 AC073349.3-201ENST00000617616 186 ntBASIC0.4□□□□□ -2.35
APOEP02649 AC243994.1-201ENST00000618627 109 ntBASIC0.4□□□□□ -2.35
APOEP02649 PVT1_3.1-201ENST00000620853 95 ntBASIC0.4□□□□□ -2.35
APOEP02649 AC099654.13-201ENST00000639774 207 ntBASIC0.4□□□□□ -2.35
APOEP02649 AL589743.1-201ENST00000551932 2712 ntBASIC0.39□□□□□ -2.35
APOEP02649 RNU6-501P-201ENST00000364072 100 ntBASIC0.39□□□□□ -2.35
APOEP02649 RNU6-1305P-201ENST00000364353 104 ntBASIC0.39□□□□□ -2.35
APOEP02649 Y_RNA.367-201ENST00000365544 101 ntBASIC0.39□□□□□ -2.35
APOEP02649 AC084290.1-201ENST00000434995 374 ntBASIC0.39□□□□□ -2.35
APOEP02649 AC104850.1-201ENST00000435940 476 ntBASIC0.39□□□□□ -2.35
APOEP02649 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.39□□□□□ -2.35
APOEP02649 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.39□□□□□ -2.35
APOEP02649 AL049830.1-201ENST00000468034 425 ntBASIC0.39□□□□□ -2.35
APOEP02649 AC113410.1-201ENST00000505029 247 ntBASIC0.39□□□□□ -2.35
APOEP02649 RNU4-57P-201ENST00000515980 135 ntBASIC0.39□□□□□ -2.35
APOEP02649 RNU6-917P-201ENST00000516294 104 ntBASIC0.39□□□□□ -2.35
APOEP02649 AC090049.2-201ENST00000550377 109 ntBASIC0.39□□□□□ -2.35
APOEP02649 AC012557.2-201ENST00000605919 418 ntBASIC0.39□□□□□ -2.35
APOEP02649 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
APOEP02649 AC027807.2-201ENST00000616099 408 ntBASIC0.39□□□□□ -2.35
APOEP02649 AL049777.1-201ENST00000622740 518 ntBASIC0.39□□□□□ -2.35
APOEP02649 AC022418.1-201ENST00000624118 445 ntBASIC0.39□□□□□ -2.35
APOEP02649 RNU6-199P-201ENST00000362954 107 ntBASIC0.38□□□□□ -2.35
APOEP02649 RNU4-48P-201ENST00000365559 182 ntBASIC0.38□□□□□ -2.35
APOEP02649 SNORD116-13-201ENST00000384408 92 ntBASIC0.38□□□□□ -2.35
APOEP02649 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
APOEP02649 MRPL42P3-201ENST00000401492 326 ntBASIC0.38□□□□□ -2.35
APOEP02649 AL451046.2-201ENST00000403074 277 ntBASIC0.38□□□□□ -2.35
APOEP02649 AL034345.1-201ENST00000407768 123 ntBASIC0.38□□□□□ -2.35
APOEP02649 SNORD99-201ENST00000408612 74 ntBASIC0.38□□□□□ -2.35
APOEP02649 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.38□□□□□ -2.35
APOEP02649 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.38□□□□□ -2.35
APOEP02649 snoU109.3-201ENST00000459477 145 ntBASIC0.38□□□□□ -2.35
APOEP02649 RNU7-57P-201ENST00000459540 60 ntBASIC0.38□□□□□ -2.35
APOEP02649 AC090572.1-201ENST00000519251 160 ntBASIC0.38□□□□□ -2.35
APOEP02649 AC007834.2-201ENST00000536310 343 ntBASIC0.38□□□□□ -2.35
APOEP02649 AC018659.1-201ENST00000551083 169 ntBASIC0.38□□□□□ -2.35
APOEP02649 PCMTD1P2-201ENST00000565017 355 ntBASIC0.38□□□□□ -2.35
APOEP02649 MIR4999-201ENST00000585029 91 ntBASIC0.38□□□□□ -2.35
APOEP02649 PRELID3BP2-201ENST00000605362 201 ntBASIC0.38□□□□□ -2.35
APOEP02649 AL359075.3-201ENST00000613288 217 ntBASIC0.38□□□□□ -2.35
APOEP02649 TCL6_2.1-201ENST00000615162 119 ntBASIC0.38□□□□□ -2.35
APOEP02649 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.38□□□□□ -2.35
APOEP02649 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
APOEP02649 CASC19-280ENST00000642102 1351 ntBASIC0.37□□□□□ -2.35
APOEP02649 VTRNA1-3-201ENST00000365645 89 ntBASIC0.37□□□□□ -2.35
APOEP02649 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
APOEP02649 RNU6-906P-201ENST00000384700 70 ntBASIC0.37□□□□□ -2.35
APOEP02649 MIR216A-201ENST00000385063 110 ntBASIC0.37□□□□□ -2.35
APOEP02649 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.37□□□□□ -2.35
APOEP02649 CDK8P2-201ENST00000415020 547 ntBASIC0.37□□□□□ -2.35
APOEP02649 AC092423.1-201ENST00000430165 186 ntBASIC0.37□□□□□ -2.35
APOEP02649 FABP5P4-201ENST00000437203 171 ntBASIC0.37□□□□□ -2.35
APOEP02649 MTCO3P8-201ENST00000453691 755 ntBASIC0.37□□□□□ -2.35
APOEP02649 RPL39P39-201ENST00000455840 151 ntBASIC0.37□□□□□ -2.35
APOEP02649 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.37□□□□□ -2.35
APOEP02649 AC068787.1-201ENST00000623908 691 ntBASIC0.37□□□□□ -2.35
APOEP02649 AL359697.1-201ENST00000624879 587 ntBASIC0.37□□□□□ -2.35
APOEP02649 AC134026.1-201ENST00000623249 2239 ntBASIC0.36□□□□□ -2.35
APOEP02649 AP000568.1-201ENST00000282964 442 ntBASIC0.36□□□□□ -2.35
APOEP02649 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.36□□□□□ -2.35
APOEP02649 Y_RNA.480-201ENST00000384364 102 ntBASIC0.36□□□□□ -2.35
APOEP02649 RNU6-393P-201ENST00000384475 107 ntBASIC0.36□□□□□ -2.35
APOEP02649 AL356583.2-201ENST00000426536 280 ntBASIC0.36□□□□□ -2.35
APOEP02649 AC009237.7-201ENST00000447357 229 ntBASIC0.36□□□□□ -2.35
APOEP02649 RNU2-69P-201ENST00000516061 100 ntBASIC0.36□□□□□ -2.35
APOEP02649 AC025647.1-201ENST00000517879 253 ntBASIC0.36□□□□□ -2.35
APOEP02649 RNU6-323P-201ENST00000521915 107 ntBASIC0.36□□□□□ -2.35
APOEP02649 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.36□□□□□ -2.35
APOEP02649 AP002001.1-203ENST00000534002 267 ntBASIC0.36□□□□□ -2.35
APOEP02649 MIR98-201ENST00000606724 119 ntBASIC0.36□□□□□ -2.35
APOEP02649 AC091304.9-201ENST00000612091 226 ntBASIC0.36□□□□□ -2.35
APOEP02649 AL133173.2-201ENST00000614270 90 ntBASIC0.36□□□□□ -2.35
APOEP02649 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.36□□□□□ -2.35
APOEP02649 SNORD114-23-201ENST00000363536 72 ntBASIC0.35□□□□□ -2.35
APOEP02649 RNU6-342P-201ENST00000384521 104 ntBASIC0.35□□□□□ -2.35
APOEP02649 SNORA16.2-201ENST00000390991 127 ntBASIC0.35□□□□□ -2.35
APOEP02649 SNORD70.1-201ENST00000391007 85 ntBASIC0.35□□□□□ -2.35
APOEP02649 AL031577.2-201ENST00000404133 280 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 390.5 ms