Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MIR1468-201ENST00000410600 86 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 AC010154.1-201ENST00000425857 269 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 AC074290.1-201ENST00000448883 135 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
ABCA1O95477 RNU6-377P-201ENST00000515965 102 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 RNU2-34P-201ENST00000516534 121 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 AC004584.2-201ENST00000570407 410 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 AC008752.3-201ENST00000588113 712 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 AC104408.1-201ENST00000605241 170 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 AC063943.3-201ENST00000615562 356 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 RNU6-552P-201ENST00000362869 119 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 RNU6-723P-201ENST00000383973 107 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.01□□□□□ -2.41
ABCA1O95477 C1DP2-201ENST00000418167 426 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 AL590135.1-201ENST00000422215 156 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 AC019205.3-201ENST00000424573 156 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 AC016700.2-201ENST00000446011 156 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 MTND2P3-201ENST00000452458 470 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 C1DP4-201ENST00000455429 424 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 AC015911.1-201ENST00000495111 156 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 RNU6-917P-201ENST00000516294 104 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.01□□□□□ -2.41
ABCA1O95477 MIR5006-201ENST00000583027 110 ntBASIC-0.01□□□□□ -2.41
ABCA1O95477 RNU1-76P-201ENST00000362903 159 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 SNORA42.1-201ENST00000363515 137 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
ABCA1O95477 MIR578-201ENST00000384828 96 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 CALM2P3-201ENST00000400429 449 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 MIR300-201ENST00000401138 83 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 USP9YP28-201ENST00000435142 589 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.02□□□□□ -2.41
ABCA1O95477 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.02□□□□□ -2.41
ABCA1O95477 MTND3P5-201ENST00000512798 333 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 RNA5SP67-201ENST00000516422 131 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.02□□□□□ -2.41
ABCA1O95477 MIR4290-201ENST00000583807 95 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 AC091805.2-201ENST00000603848 235 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 AC104695.3-201ENST00000604052 296 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 AC064807.4-201ENST00000607201 407 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 AC017083.3-201ENST00000609955 700 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 AL359075.3-201ENST00000613288 217 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 uc_338.6-201ENST00000613544 171 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 AC073343.1-201ENST00000328239 651 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 MIR224-201ENST00000384889 81 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 MIR891A-201ENST00000401237 79 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 RNU2-46P-201ENST00000517038 113 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 AL158042.1-201ENST00000605338 460 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.02□□□□□ -2.41
ABCA1O95477 AC078880.5-201ENST00000617845 421 ntBASIC-0.02□□□□□ -2.41
ABCA1O95477 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.02□□□□□ -2.41
ABCA1O95477 SNORD114-5-201ENST00000362928 70 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 RNY4P16-201ENST00000364768 94 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 SNORD105-201ENST00000386910 85 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 RN7SKP266-201ENST00000410232 287 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.03□□□□□ -2.41
ABCA1O95477 AC013470.1-201ENST00000453438 462 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 RNU7-14P-201ENST00000459331 62 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 AL049830.1-201ENST00000468034 425 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 RNU1-142P-201ENST00000516682 145 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 AL390123.1-201ENST00000603216 237 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 AC080078.2-201ENST00000603766 501 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 AC097478.2-201ENST00000610572 514 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 AC106754.2-201ENST00000623006 233 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 MTND5P16-201ENST00000460269 1703 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 MIRLET7D-201ENST00000362263 87 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 RNU6-371P-201ENST00000364283 108 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 RNU6-378P-201ENST00000384324 107 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 SNAP23P1-201ENST00000433229 246 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-0.03□□□□□ -2.41
ABCA1O95477 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.03□□□□□ -2.41
ABCA1O95477 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.03□□□□□ -2.41
ABCA1O95477 MIR5692A1-201ENST00000580523 69 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
ABCA1O95477 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.04□□□□□ -2.42
ABCA1O95477 RNU6-514P-201ENST00000384208 107 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 MIR153-2-201ENST00000385225 87 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 MIR549A-201ENST00000385268 96 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 SNORA40.2-201ENST00000390847 128 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 HSFY7P-201ENST00000432672 318 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 HSFY8P-201ENST00000437934 318 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.04□□□□□ -2.42
ABCA1O95477 AC025465.4-201ENST00000513422 638 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 MTCO3P27-201ENST00000514397 196 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 RNU1-86P-201ENST00000516108 154 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 RNU1-107P-201ENST00000516617 154 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 AC022523.2-201ENST00000561045 150 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 AC108747.1-201ENST00000609508 535 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 MIR6755-201ENST00000619993 66 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 AC024940.5-201ENST00000622889 474 ntBASIC-0.04□□□□□ -2.42
ABCA1O95477 AC006927.2-201ENST00000639256 389 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms