Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AL133217.1-201ENST00000450980 425 ntBASIC-0.8□□□□□ -2.54
LTN1O94822 AL139824.2-201ENST00000458731 1095 ntBASIC-0.8□□□□□ -2.54
LTN1O94822 RNU7-59P-201ENST00000459101 61 ntBASIC-0.8□□□□□ -2.54
LTN1O94822 RNU6-977P-201ENST00000516411 103 ntBASIC-0.8□□□□□ -2.54
LTN1O94822 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.8□□□□□ -2.54
LTN1O94822 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.8□□□□□ -2.54
LTN1O94822 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.8□□□□□ -2.54
LTN1O94822 RNU6-94P-201ENST00000607728 107 ntBASIC-0.8□□□□□ -2.54
LTN1O94822 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.81□□□□□ -2.54
LTN1O94822 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.81□□□□□ -2.54
LTN1O94822 RNU6-673P-201ENST00000365084 104 ntBASIC-0.81□□□□□ -2.54
LTN1O94822 SNORA2B-201ENST00000384583 137 ntBASIC-0.81□□□□□ -2.54
LTN1O94822 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.81□□□□□ -2.54
LTN1O94822 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.81□□□□□ -2.54
LTN1O94822 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.81□□□□□ -2.54
LTN1O94822 RNU6-856P-201ENST00000516959 98 ntBASIC-0.81□□□□□ -2.54
LTN1O94822 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.81□□□□□ -2.54
LTN1O94822 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.81□□□□□ -2.54
LTN1O94822 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
LTN1O94822 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.82□□□□□ -2.54
LTN1O94822 RNU6-57P-201ENST00000411348 103 ntBASIC-0.82□□□□□ -2.54
LTN1O94822 AL354692.1-201ENST00000423044 315 ntBASIC-0.82□□□□□ -2.54
LTN1O94822 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.82□□□□□ -2.54
LTN1O94822 AC092427.1-201ENST00000439177 601 ntBASIC-0.82□□□□□ -2.54
LTN1O94822 AL163973.1-201ENST00000484753 577 ntBASIC-0.82□□□□□ -2.54
LTN1O94822 AC023538.1-201ENST00000534576 736 ntBASIC-0.82□□□□□ -2.54
LTN1O94822 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.82□□□□□ -2.54
LTN1O94822 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.82□□□□□ -2.54
LTN1O94822 AP000676.3-201ENST00000623299 569 ntBASIC-0.82□□□□□ -2.54
LTN1O94822 AC006927.4-201ENST00000639187 543 ntBASIC-0.82□□□□□ -2.54
LTN1O94822 MIR544A-201ENST00000384855 91 ntBASIC-0.83□□□□□ -2.54
LTN1O94822 SNORD83.1-201ENST00000411362 77 ntBASIC-0.83□□□□□ -2.54
LTN1O94822 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.83□□□□□ -2.54
LTN1O94822 RNA5SP94-201ENST00000516917 108 ntBASIC-0.83□□□□□ -2.54
LTN1O94822 AC138869.1-201ENST00000568623 124 ntBASIC-0.83□□□□□ -2.54
LTN1O94822 MIR1273C-201ENST00000578669 77 ntBASIC-0.83□□□□□ -2.54
LTN1O94822 MTND4P4-201ENST00000439033 1366 ntBASIC-0.83□□□□□ -2.54
LTN1O94822 SNORA32.2-201ENST00000384049 122 ntBASIC-0.83□□□□□ -2.54
LTN1O94822 RNU6-701P-201ENST00000384059 107 ntBASIC-0.83□□□□□ -2.54
LTN1O94822 RPL17P35-201ENST00000432217 549 ntBASIC-0.83□□□□□ -2.54
LTN1O94822 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.83□□□□□ -2.54
LTN1O94822 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.83□□□□□ -2.54
LTN1O94822 DEFB131D-201ENST00000526803 184 ntBASIC-0.83□□□□□ -2.54
LTN1O94822 DEFB131C-201ENST00000528817 165 ntBASIC-0.83□□□□□ -2.54
LTN1O94822 AC090617.9-201ENST00000623751 147 ntBASIC-0.83□□□□□ -2.54
LTN1O94822 RNU6-216P-201ENST00000363282 104 ntBASIC-0.84□□□□□ -2.54
LTN1O94822 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.84□□□□□ -2.54
LTN1O94822 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.84□□□□□ -2.54
LTN1O94822 AC113347.3-201ENST00000509113 148 ntBASIC-0.84□□□□□ -2.54
LTN1O94822 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.84□□□□□ -2.54
LTN1O94822 DPPA3P3-201ENST00000603842 430 ntBASIC-0.84□□□□□ -2.54
LTN1O94822 AL357080.1-201ENST00000617394 239 ntBASIC-0.84□□□□□ -2.54
LTN1O94822 AP000484.1-201ENST00000620067 1252 ntBASIC-0.84□□□□□ -2.54
LTN1O94822 RNU6-97P-201ENST00000363387 104 ntBASIC-0.85□□□□□ -2.55
LTN1O94822 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.85□□□□□ -2.55
LTN1O94822 SNORD111.1-201ENST00000516421 86 ntBASIC-0.85□□□□□ -2.55
LTN1O94822 AC022217.4-201ENST00000604389 163 ntBASIC-0.85□□□□□ -2.55
LTN1O94822 BX322639.1-202ENST00000423987 2213 ntBASIC-0.85□□□□□ -2.55
LTN1O94822 RNU6-652P-201ENST00000365488 107 ntBASIC-0.85□□□□□ -2.55
LTN1O94822 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.85□□□□□ -2.55
LTN1O94822 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.85□□□□□ -2.55
LTN1O94822 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.85□□□□□ -2.55
LTN1O94822 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.85□□□□□ -2.55
LTN1O94822 MRPS36P4-201ENST00000534436 298 ntBASIC-0.85□□□□□ -2.55
LTN1O94822 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.86□□□□□ -2.55
LTN1O94822 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.86□□□□□ -2.55
LTN1O94822 MIR301A-201ENST00000385261 86 ntBASIC-0.86□□□□□ -2.55
LTN1O94822 AL136310.1-201ENST00000404926 654 ntBASIC-0.86□□□□□ -2.55
LTN1O94822 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.86□□□□□ -2.55
LTN1O94822 ZNF886P-201ENST00000450781 723 ntBASIC-0.86□□□□□ -2.55
LTN1O94822 HSFY5P-201ENST00000453726 309 ntBASIC-0.86□□□□□ -2.55
LTN1O94822 RNU6-567P-201ENST00000516746 107 ntBASIC-0.86□□□□□ -2.55
LTN1O94822 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.86□□□□□ -2.55
LTN1O94822 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.86□□□□□ -2.55
LTN1O94822 AC023824.3-201ENST00000569003 562 ntBASIC-0.86□□□□□ -2.55
LTN1O94822 AC004584.2-201ENST00000570407 410 ntBASIC-0.86□□□□□ -2.55
LTN1O94822 TMF1P1-201ENST00000576058 373 ntBASIC-0.86□□□□□ -2.55
LTN1O94822 AL162726.3-218ENST00000636401 95 ntBASIC-0.86□□□□□ -2.55
LTN1O94822 SNORD56.1-201ENST00000362913 68 ntBASIC-0.87□□□□□ -2.55
LTN1O94822 RNU6-127P-201ENST00000390897 107 ntBASIC-0.87□□□□□ -2.55
LTN1O94822 AC069271.1-201ENST00000445577 156 ntBASIC-0.87□□□□□ -2.55
LTN1O94822 AL392103.1-201ENST00000447000 198 ntBASIC-0.87□□□□□ -2.55
LTN1O94822 AC022447.4-201ENST00000504053 364 ntBASIC-0.87□□□□□ -2.55
LTN1O94822 AL391840.1-201ENST00000571144 367 ntBASIC-0.87□□□□□ -2.55
LTN1O94822 MIR548AO-201ENST00000579992 96 ntBASIC-0.87□□□□□ -2.55
LTN1O94822 AC012507.3-201ENST00000603556 477 ntBASIC-0.87□□□□□ -2.55
LTN1O94822 AP000811.1-201ENST00000603803 651 ntBASIC-0.87□□□□□ -2.55
LTN1O94822 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.87□□□□□ -2.55
LTN1O94822 PCNPP3-201ENST00000393579 471 ntBASIC-0.88□□□□□ -2.55
LTN1O94822 RNA5SP201-201ENST00000410316 124 ntBASIC-0.88□□□□□ -2.55
LTN1O94822 AC007283.2-201ENST00000424739 197 ntBASIC-0.88□□□□□ -2.55
LTN1O94822 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.88□□□□□ -2.55
LTN1O94822 AC115990.1-201ENST00000526957 301 ntBASIC-0.88□□□□□ -2.55
LTN1O94822 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.88□□□□□ -2.55
LTN1O94822 ZNF885P-201ENST00000420174 1098 ntBASIC-0.88□□□□□ -2.55
LTN1O94822 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.88□□□□□ -2.55
LTN1O94822 AC245047.3-201ENST00000429428 127 ntBASIC-0.88□□□□□ -2.55
LTN1O94822 MTND4P15-201ENST00000437913 1033 ntBASIC-0.88□□□□□ -2.55
LTN1O94822 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.88□□□□□ -2.55
LTN1O94822 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms